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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00402 ATGGCATCCATCTCCACCTCCCTTCCAATCTCATCACCCTCCTTGTCTCTGCTCCAAAAGCCAACGATCACTGCCCGCAGTTCTCCAGTTCTTCGATTGCCATCGATGAGCAAGATGGGTAAAGTGAGATGTTCCGTGGAAGGCAAGCCTGATGTCATATCCAAGGACAGTGTACCCGATTTCATTGTACCAGGAAAGAGTTCATGGCCAGAGCTTGTAGGGGAAAAAGGAGAAGTGGCAAAAGCGATAATTGAGAAAGAAAATCCACTAGTCAATGCTATCATAATATCTGGAAATTCTCCCACCACGGATATGATGTTTGTGTCCAACCGTGTGAGGGTTGTGGTGAATGCTGAGGGATTGGTGACTAAAACACCCATCATTGGCTAG 390 46.92 MASISTSLPISSPSLSLLQKPTITARSSPVLRLPSMSKMGKVRCSVEGKPDVISKDSVPDFIVPGKSSWPELVGEKGEVAKAIIEKENPLVNAIIISGNSPTTDMMFVSNRVRVVVNAEGLVTKTPIIG 129
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00402 129 Pfam Potato inhibitor I family 66 129 IPR000864 GO:0004867(InterPro)|GO:0009611(InterPro)
Hean1g00402 129 SUPERFAMILY CI-2 family of serine protease inhibitors 64 129 IPR036354 -
Hean1g00402 129 ProSitePatterns Potato inhibitor I family signature. 69 80 IPR000864 GO:0004867(InterPro)|GO:0009611(InterPro)
Hean1g00402 129 Gene3D Trypsin Inhibitor V, subunit A 53 128 - -
Hean1g00402 129 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 65 129 IPR000864 GO:0004867(InterPro)|GO:0009611(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00402 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:11374115 Hean1g00404 Hean-Chr1:11406805 dispersed
Hean Hean-Chr1:11355272 Hean1g00402 Hean-Chr1:11374115 tandem