Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00406 | ATGGCATCGATCTCCACCTCCCTTCCAATCTCATCACCCTCCTTGTCTCTGCTCCAAAAGCCAACGATCACTGCCCGCGGTTCTCCAGTTCTTAGATTGCCATCGATGAGCAAGATGGGGAAAGTGAGATGTTCCGTGGAAGGTAAGCCCAATGTCATATCCGACGATTTCTTTGTACCAGGAAAGAATTCATGGCCAGAGCTTGTAGGGGAAAAAGGAGAAGTGGCAAAAGGGATAATTGAGAAAGAAAATCCACTAGTCAATGCTATCATAATATCTGAAAATTCTGCCATGATTTCTGACCTTGTGTCCAACCGTGTGTGGGTTGTGGTGAATGCTGAGGGATTGGTGATTAAAACACCCGTCATTGGCTAG | 375 | 46.13 | MASISTSLPISSPSLSLLQKPTITARGSPVLRLPSMSKMGKVRCSVEGKPNVISDDFFVPGKNSWPELVGEKGEVAKGIIEKENPLVNAIIISENSAMISDLVSNRVWVVVNAEGLVIKTPVIG | 124 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00406 | 124 | SUPERFAMILY | CI-2 family of serine protease inhibitors | 58 | 124 | IPR036354 | - | |
| Hean1g00406 | 124 | ProSitePatterns | Potato inhibitor I family signature. | 65 | 76 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Hean1g00406 | 124 | Gene3D | Trypsin Inhibitor V, subunit A | 57 | 123 | - | - | |
| Hean1g00406 | 124 | PANTHER | PROTEIN, PUTATIVE, EXPRESSED-RELATED | 61 | 124 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Hean1g00406 | 124 | Pfam | Potato inhibitor I family | 62 | 124 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00406 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr1:11068549 | Hean1g00406 | Hean-Chr1:11423123 | dispersed | |
| Hean | Hean-Chr1:11406805 | Hean1g00406 | Hean-Chr1:11423123 | dispersed | |
| Hean | Hean-Chr1:11423123 | Hean1g01756 | Hean-Chr1:84093529 | dispersed | |
| Hean | Hean-Chr1:11423123 | Hean1g00408 | Hean-Chr1:11447334 | proximal | |
| Hean | Hean-Chr1:11412416 | Hean1g00406 | Hean-Chr1:11423123 | tandem |