AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00411 ATGAAATGGGGGCTTATTCCAAGTTTCACCAAAAAAACTGAAAAACCTGACTATTATAGAATGTTCAATGCTCGATCAGAGTCAATCGGTGAAAAGGCCTCCTTCGCCTTCTTCCCGGAAATAGGTGTTTGGTTGCTGTTGAAGGGTAAATTTTATGAGTGGAAGAAAGATGGGTCAAAAAAGCAGCCATATTATATTCATCTGAAGGATGATCGCCCCCTTGTCTTTGCTGCTCTTTATGATTCCTGGAAAAACTCTGAAGGGGAGGTTCAATACACCTTCACTATTTTGACAACAAGTTCTTCGTCAGCCTTAGGTTGGCTGCATGATGGTTCTTCATCTTCCAAGTTTGATTCATTGCTTAAACCGTATGAAGAGCCAGACTTGGTTTGGTACCCCGTAACACCTGCAATGGGCAAACCTTCTTTCGATGGACCCGACTGTATCAAGGAGGTAAAGATCGAGGAAACAAAACCGATCTCAATGTTCTTTGCAAAAAAGGTCACTAAAAAGGAAGATCCGTCAGAGCATCAACTTCCCGCTGCACATAAAGAGGTCACCGAAACAGAAAAACCAAAAGGCCCGAAAGAGGAACCCGAAACTTATGTGGGTCCCAGCACATTGAATCTCAAACGCGAGTATGGTGACTTTTCTTCTGATATAAAACCGCCTGTCAATGAAGATGCTGACAACCAGTATAAAAGTCCAGCTAAAAAGGGAAACTTTAAGAGCCCTGGTGACAAGCAAAAGACACTATTCTCGTACTTTGGGAAAGGTTAA 780 42.44 MKWGLIPSFTKKTEKPDYYRMFNARSESIGEKASFAFFPEIGVWLLLKGKFYEWKKDGSKKQPYYIHLKDDRPLVFAALYDSWKNSEGEVQYTFTILTTSSSSALGWLHDGSSSSKFDSLLKPYEEPDLVWYPVTPAMGKPSFDGPDCIKEVKIEETKPISMFFAKKVTKKEDPSEHQLPAAHKEVTETEKPKGPKEEPETYVGPSTLNLKREYGDFSSDIKPPVNEDADNQYKSPAKKGNFKSPGDKQKTLFSYFGKG 259
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00411 259 SUPERFAMILY BB1717-like 1 152 IPR036590 -
Hean1g00411 259 Pfam SOS response associated peptidase (SRAP) 1 110 IPR003738 GO:0003697(InterPro)|GO:0006974(InterPro)|GO:0106300(InterPro)
Hean1g00411 259 Gene3D - 1 158 IPR036590 -
Hean1g00411 259 PANTHER DC12-RELATED 1 247 IPR003738 GO:0003697(InterPro)|GO:0006974(InterPro)|GO:0106300(InterPro)
Hean1g00411 259 MobiDBLite consensus disorder prediction 169 198 - -
Hean1g00411 259 MobiDBLite consensus disorder prediction 169 259 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00411 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:11884347 Hean1g00412 Hean-Chr1:11890217 tandem