AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00412 ATGTGCGGCCGTTGTCGCTGTTCTATCCGTCCAGATGACGTCCCTCGCGCTTGCAACATCGGTAACCGCCCCGTTCGTTTTGTCCATACAGACCGGTTCCGAGCAGCATATAATGTTTCACCTGGATCAAACATCCCTGTTGTTCGAAGAGACACGGAAGCTGACGGTCAGGGAGCTGTTGTGCAGTGCATGAAATGGGGGCTTATTCCAAGTTTCACTAAAAAGACTGAAAAACCTGACTATTATAGAATGTTTAATGCTCGATCAGAGTCAATTGGTGAAAAGGCCTCCTTTCGCCGCCTTCTTTCTGGAAACAGGTGCTTGGTTGCTGTTGAAGGATTTTACGAGTGGAAGAAAGATGGGTCGAAAAAGCAGCCATACTATATTCATCTGAAGGATGATCGCCCCCTTGTCTTTGCTGCTCTTTATGATTCCTGGAAAAACTCTGAAGGGGAGGTTCAATACACCTTCACTATTTTGACAACAAGTTCCTCATCAGCCTTAGGTTGGCTGCATGACAGGATGCCTGTTATATTAGGGAATAAAGAGTCAACTGATGAGTGGCTAGATGGTTCTTCATCTTCCAAGTTTGATTCATTGCTTAAACCGTACGAAGAGCCAGACTTGGTTTGGTACCCCGTAACACCTGCAATGGGCAAACCTTCTTTCGATGGACCTGACTGTATCAAGGAGGTAAAGATCGAGGAAACAAAACCGATCTCAATGTTCTTTGCAAAAAAGGTCACTAAAAAGGAAGATCCGTCAGAGCATCAACTTCCCGCTGCACATAAAGAGGTCACCGAAACAGAAAAACCAAAAGGCCCGAAAGAGGAACCCGAAACTTATGTGGGTCCCAGCACATTGAATCTCAAACGCGAGTATGGTGACTTTTCTTCTGATATAAAACCGCCTGTCAATGAAGATGCTGACAACCAGTATAAAAGTCCAGCTAAAAAGGGAAACTTTAAGAGCCCTGGTGACAAGCAAAAGACACTATTCTCGTACTTTGGGAAAGGTTAA 1020 44.9 MCGRCRCSIRPDDVPRACNIGNRPVRFVHTDRFRAAYNVSPGSNIPVVRRDTEADGQGAVVQCMKWGLIPSFTKKTEKPDYYRMFNARSESIGEKASFRRLLSGNRCLVAVEGFYEWKKDGSKKQPYYIHLKDDRPLVFAALYDSWKNSEGEVQYTFTILTTSSSSALGWLHDRMPVILGNKESTDEWLDGSSSSKFDSLLKPYEEPDLVWYPVTPAMGKPSFDGPDCIKEVKIEETKPISMFFAKKVTKKEDPSEHQLPAAHKEVTETEKPKGPKEEPETYVGPSTLNLKREYGDFSSDIKPPVNEDADNQYKSPAKKGNFKSPGDKQKTLFSYFGKG 339
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00412 339 PANTHER DC12-RELATED 1 327 IPR003738 GO:0003697(InterPro)|GO:0006974(InterPro)|GO:0106300(InterPro)
Hean1g00412 339 MobiDBLite consensus disorder prediction 249 278 - -
Hean1g00412 339 Pfam SOS response associated peptidase (SRAP) 1 220 IPR003738 GO:0003697(InterPro)|GO:0006974(InterPro)|GO:0106300(InterPro)
Hean1g00412 339 SUPERFAMILY BB1717-like 2 232 IPR036590 -
Hean1g00412 339 MobiDBLite consensus disorder prediction 249 339 - -
Hean1g00412 339 Gene3D - 1 238 IPR036590 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00412 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:11884347 Hean1g00412 Hean-Chr1:11890217 tandem