Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00427 | ATGAAGAAAAAGCTCGATACCCGTTTCCCTGCTGCCCGGATTAAAAAGATAATGCAAGCTGATGAGGATGTTGGAAAGATTGCCATGGCCGTGCCAGTATTAGTTTCCAAAGCATTGGAATTGTTCTTGCAAGATCTTTGTGATCGTACATATGACATCACTCTTCGTAGAGGAGCAAAGACTGTTAACTCACTTCATTTGAAGCATTGTGTTCAAAGCTACAATGTGTATGATTTTCTGAGGGAAGTTGTCAGCAAGGTCCCTGACTATGGCCACTCAGAAGCTGGTGGTGATGAGCGTACAATGGCAAAGAGAAAGAAAGCTTCTGCTGATGAAATGAATGAAAGTGATGATGAATTGAAGAAAAATCGGATGAATGAAGGCGGACATACAAGCAGCAGTGGGAGAGGCAGAGGACGGGGTAGAGGAAGAGGCCGTGGCAGAGGTAGAGTATCTGCAGAACGAGATCCTCCCCCCACTGAACCTGAATCTGTTCATCACAGCAGCAAGCCCACAACCGACATCCACTCGGAGTCCATCACTGCAGTCGACGACGTTGTTCCAAGCAGAGGCTTCGATCTCAATGCTGGCCTTGATGAGAATACAGATAAAGTGTCTGCTGCTGCATCAGATGGTGCTGCGCCACCACAACCACCACCACCAGCAGTGGTTGCAGAACCTAGTGAAGTTGCAAATAATGAGTACCCTGGGTGGTCAGTTTCAGAAATCGACAGGATGGCCATTGACCCTCATCTTGCACACGCCAACTCAAGGTTGGATGAGGAAGATGAAGACTATGATGAAGAGTAA | 810 | 47.16 | MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLRRGAKTVNSLHLKHCVQSYNVYDFLREVVSKVPDYGHSEAGGDERTMAKRKKASADEMNESDDELKKNRMNEGGHTSSSGRGRGRGRGRGRGRGRVSAERDPPPTEPESVHHSSKPTTDIHSESITAVDDVVPSRGFDLNAGLDENTDKVSAAASDGAAPPQPPPPAVVAEPSEVANNEYPGWSVSEIDRMAIDPHLAHANSRLDEEDEDYDEE | 269 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00427 | 269 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 4 | 174 | IPR050568 | GO:0001046(PANTHER)|GO:0005634(PANTHER)|GO:0016251(PANTHER) | |
| Hean1g00427 | 269 | MobiDBLite | consensus disorder prediction | 89 | 126 | - | - | |
| Hean1g00427 | 269 | FunFam | dr1-associated corepressor homolog | 1 | 86 | - | - | |
| Hean1g00427 | 269 | Pfam | Histone-like transcription factor (CBF-NF-Y) and archaeal histone | 8 | 71 | IPR003958 | - | |
| Hean1g00427 | 269 | MobiDBLite | consensus disorder prediction | 89 | 225 | - | - | |
| Hean1g00427 | 269 | Gene3D | Histone, subunit A | 1 | 86 | IPR009072 | GO:0046982(InterPro) | |
| Hean1g00427 | 269 | SUPERFAMILY | Histone-fold | 3 | 88 | IPR009072 | GO:0046982(InterPro) | |
| Hean1g00427 | 269 | MobiDBLite | consensus disorder prediction | 147 | 173 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00427 | K21752 | Dr1-associated corepressor |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 402315 | Hean11g02976 | Hean1g00427 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr11:140287210 | Hean1g00427 | Hean-Chr1:12366523 | dispersed | |
| Hean | Hean-Chr17:162012074 | Hean1g00427 | Hean-Chr1:12366523 | dispersed | |
| Hean | Hean-Chr1:12366523 | Hean3g04061 | Hean-Chr3:172104397 | dispersed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Hean17g03791 | . | 1 | 230 | CCAAT-HAP5 Transcription Factor family | AT3G12480 | 53.814 | 1.72e-69 | 216.0 | |
| Hean14g02429 | . | 1 | 219 | CCAAT-HAP5 Transcription Factor family | AT1G08970 | 58.13 | 1.19e-79 | 238.0 | |
| Hean13g01774 | . | 80 | 152 | CCAAT-HAP5 Transcription Factor family | AT1G54830 | 87.671 | 4.16e-43 | 137.0 | |
| Hean13g03367 | WGDA | 69 | 146 | CCAAT-HAP5 Transcription Factor family | AT1G54830 | 65.823 | 1.29e-32 | 112.0 | |
| Hean12g00596 | WGDA | 40 | 219 | CCAAT-HAP5 Transcription Factor family | AT1G08970 | 73.404 | 6.10e-83 | 246.0 | |
| Hean11g02976 | WGDA | 1 | 140 | CCAAT-HAP5 Transcription Factor family | AT3G12480 | 68.571 | 1.29e-63 | 200.0 | |
| Hean10g03256 | WGDA | 7 | 219 | CCAAT-HAP5 Transcription Factor family | AT1G08970 | 63.203 | 1.89e-81 | 241.0 | |
| Hean9g00054 | . | 7 | 122 | CCAAT-HAP5 Transcription Factor family | AT5G43250 | 55.372 | 1.65e-41 | 132.0 | |
| Hean9g01080 | . | 1 | 219 | CCAAT-HAP5 Transcription Factor family | AT1G08970 | 60.976 | 5.71e-83 | 246.0 | |
| Hean9g02387 | . | 7 | 122 | CCAAT-HAP5 Transcription Factor family | AT5G43250 | 52.066 | 3.80e-39 | 126.0 | |
| Hean8g03135 | WGDA | 46 | 224 | CCAAT-HAP5 Transcription Factor family | AT5G63470 | 78.689 | 1.05e-91 | 268.0 | |
| Hean5g02937 | WGDA | 45 | 232 | CCAAT-HAP5 Transcription Factor family | AT5G63470 | 76.72 | 2.36e-86 | 254.0 | |
| Hean3g03631 | WGDA | 69 | 146 | CCAAT-HAP5 Transcription Factor family | AT1G54830 | 67.089 | 7.88e-34 | 115.0 | |
| Hean3g04061 | . | 1 | 282 | CCAAT-HAP5 Transcription Factor family | AT3G12480 | 46.599 | 2.94e-62 | 196.0 | |
| Hean1g00427 | WGDA | 1 | 140 | CCAAT-HAP5 Transcription Factor family | AT3G12480 | 72.143 | 1.65e-68 | 212.0 | |
| Hean1g02586 | . | 77 | 199 | CCAAT-HAP5 Transcription Factor family | AT1G07980 | 44.697 | 2.09e-29 | 106.0 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Hean | CBFD_NFYB_HMF | 1.5e-19 | CL0012 | TF | NF-YC |