Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00431 | ATGTTTGGAAAAATCCCAACAGTTTGCCACTGTGACTACAATCGGACAGAACAAAAGGCGATCGCAAGTAAAAACTACACAACTGAAGAAAATGGTGTCAAAGGTGAAAGTGTTAAGTGCCACAATTTGCATTCATGGTTCGGTGATAAGGGGCTCTCAGTGCTTGCCCGGTTGGAAGGCCACTCGAAGGATGTAACTGGGATTGTCTTCCCATCTGGATCCAATAATCTTTATTGCGGTAGCAAGGACAAATCTCTTCGAGTTTGGGATTGTAATAGTGGACAGTGTGGGACTTTGGTTGAAGAAGGTCCATGGATCTTTGCTGGGCTTCATGATATGATCAAGGCTTGGAATCATGAAACGCAAATTTCCGTAGTCATTCGAGCAAGTGGTGGAATGGTTAACGCAATTACTATGTTTGAAGACGTTCTTTTTGCTGGGACAAAGGTGAAAATCGTATCAACCTTTTCACTGATAGTGGTTCCTTTTTCGTTGAAGGTATGGGATGTTGAGTCCCTAGAGTGCAAACATGTTCTAAATGGACATAGTGGCGATGTGACAAGTGTTATATGTTGGGATCAGTATTTGTTTTCTGGTTCGTTGGATAAAACAATCAAGGTTTGGGGTGCCACTGCAAGCGGCAACATTGAGGAAGTTTATTGA | 663 | 42.53 | MFGKIPTVCHCDYNRTEQKAIASKNYTTEENGVKGESVKCHNLHSWFGDKGLSVLARLEGHSKDVTGIVFPSGSNNLYCGSKDKSLRVWDCNSGQCGTLVEEGPWIFAGLHDMIKAWNHETQISVVIRASGGMVNAITMFEDVLFAGTKVKIVSTFSLIVVPFSLKVWDVESLECKHVLNGHSGDVTSVICWDQYLFSGSLDKTIKVWGATASGNIEEVY | 220 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00431 | 220 | Gene3D | - | 161 | 219 | IPR015943 | GO:0005515(InterPro) | |
| Hean1g00431 | 220 | Pfam | WD domain, G-beta repeat | 54 | 90 | IPR001680 | GO:0005515(InterPro) | |
| Hean1g00431 | 220 | Pfam | WD domain, G-beta repeat | 174 | 208 | IPR001680 | GO:0005515(InterPro) | |
| Hean1g00431 | 220 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 58 | 99 | IPR001680 | GO:0005515(InterPro) | |
| Hean1g00431 | 220 | Gene3D | - | 32 | 159 | IPR015943 | GO:0005515(InterPro) | |
| Hean1g00431 | 220 | PANTHER | - | 165 | 220 | - | - | |
| Hean1g00431 | 220 | SMART | WD40-4 | 51 | 90 | IPR001680 | GO:0005515(InterPro) | |
| Hean1g00431 | 220 | SMART | WD40-4 | 172 | 209 | IPR001680 | GO:0005515(InterPro) | |
| Hean1g00431 | 220 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 58 | 90 | - | - | |
| Hean1g00431 | 220 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 179 | 218 | IPR001680 | GO:0005515(InterPro) | |
| Hean1g00431 | 220 | SUPERFAMILY | WD40 repeat-like | 53 | 210 | IPR036322 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00431 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr17:189727131 | Hean1g00431 | Hean-Chr1:12422691 | dispersed | |
| Hean | Hean-Chr1:12422691 | Hean5g01482 | Hean-Chr5:91232359 | dispersed |