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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00448 ATGGGCCGAAACGCTGTGGTGTTGTCGCTAGGCGGGTTCGACACGTGCTACACCGTCCCTATCAACAAACAGGTGCCCACAATGACGTTCTTGTTCGATGGGGCGGAGTTGTCGATGAAACAAGAGAACTTCCTGATCTACAGCTCCGCCGGCGGCGTCACCTGCCTGGCCATGTCGGCGTCGCCGTCGCTGAACGTGATCGCCAATATGCAGCAACAGAATCATCGGATCCTTTTTGATCTGGCAAACTCAAGGATCGGCATCTCGGCTGAAACCTGCTCTTGA 285 55.44 MGRNAVVLSLGGFDTCYTVPINKQVPTMTFLFDGAELSMKQENFLIYSSAGGVTCLAMSASPSLNVIANMQQQNHRILFDLANSRIGISAETCS 94
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00448 94 PANTHER OS07G0603500 PROTEIN-RELATED 11 88 IPR051708 -
Hean1g00448 94 Pfam Xylanase inhibitor C-terminal 11 89 IPR032799 -
Hean1g00448 94 ProSiteProfiles Peptidase family A1 domain profile. 1 89 IPR033121 -
Hean1g00448 94 Gene3D Acid Proteases 2 94 IPR021109 -
Hean1g00448 94 SUPERFAMILY Acid proteases 7 93 IPR021109 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00448 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:13133361 Hean9g01395 Hean-Chr9:82954067 dispersed
Hean Hean-Chr1:13133361 Hean4g02827 Hean-Chr4:156917265 transposed