AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00457 ATGAATCAAAATTCTACAAATACTTTTGCTTCCCAAGTAAATAAAAGAACATTAATCAACTTACTTTTTGCGGTAGCTGGTGATGTAGCCATCTGGTCAAGCCGGCTGGACTATCTGGATTTCACTCAACCATACACCGAGTTAGGTTTGGAGATGGTTGTACCTGTTAAATCTAAATTATCAAACCAGCCATGGTTGTTCATGAAGCCTTTTACTGTTACTCATTACTTATGA 234 37.18 MNQNSTNTFASQVNKRTLINLLFAVAGDVAIWSSRLDYLDFTQPYTELGLEMVVPVKSKLSNQPWLFMKPFTVTHYL 77
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00457 77 Gene3D - 6 76 - -
Hean1g00457 77 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 17 73 IPR015683 GO:0005886(PANTHER)|GO:0015276(PANTHER)|GO:0038023(PANTHER)
Hean1g00457 77 SUPERFAMILY Periplasmic binding protein-like II 24 72 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00457 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:15257289 Hean7g02090 Hean-Chr7:123588311 dispersed
Hean Hean-Chr1:15257289 Hean10g02645 Hean-Chr10:143235099 transposed
leaf

Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hean17g00729 . 30 662 Ion Channels gene family AT4G32650 59.464 0.0 744.0
Hean17g02007 . 458 526 Ion Channels gene family AT2G32390 59.42 5.80e-22 89.0
Hean17g02903 . 90 271 Ion Channels gene family AT5G40890 27.322 4.20e-06 48.1
Hean17g03683 . 83 716 Ion Channels gene family AT5G53130 56.899 0.0 743.0
Hean17g03684 . 148 511 Ion Channels gene family AT5G53130 53.908 5.30e-126 377.0
Hean17g03685 . 550 722 Ion Channels gene family AT4G30560 58.289 5.15e-61 200.0
Hean17g03688 . 66 628 Ion Channels gene family AT4G01010 53.779 0.0 630.0
Hean16g00461 . 391 439 Ion Channels gene family AT2G46430 61.224 5.23e-15 64.7
Hean16g00804 . 58 932 Ion Channels gene family AT1G05200 62.626 0.0 1176.0
Hean16g01467 . 30 830 Ion Channels gene family AT5G48410 35.03 2.64e-163 495.0
Hean16g02313 . 5 795 Ion Channels gene family AT4G22200 61.383 0.0 1019.0
Hean16g03890 . 16 431 Ion Channels gene family AT4G18160 58.974 2.44e-166 473.0
Hean16g03929 . 597 722 Ion Channels gene family AT3G17690 50.993 6.85e-37 132.0
Hean16g04716 . 22 827 Ion Channels gene family AT3G02850 68.712 0.0 1187.0
Hean15g02124 WGDA 3 676 Ion Channels gene family AT5G46240 55.061 0.0 788.0
Hean15g02302 . 19 848 Ion Channels gene family AT2G29120 35.088 3.03e-159 489.0
Hean15g03311 WGDA 2 776 Ion Channels gene family AT3G27170 74.742 0.0 1179.0
Hean15g04436 . 36 874 Ion Channels gene family AT2G29120 43.192 0.0 696.0
Hean14g00605 . 7 760 Ion Channels gene family AT3G17700 56.806 0.0 794.0
Hean14g00606 . 8 745 Ion Channels gene family AT3G17700 59.085 0.0 863.0
Hean14g01591 . 391 439 Ion Channels gene family AT2G46430 61.224 1.39e-14 63.5
Hean14g02036 . 26 888 Ion Channels gene family AT3G51480 59.379 0.0 1103.0
Hean14g02293 . 16 828 Ion Channels gene family AT3G02850 65.773 0.0 1127.0
Hean14g02769 . 54 726 Ion Channels gene family AT5G15410 55.391 0.0 737.0
Hean14g03120 . 1 678 Ion Channels gene family AT2G28260 70.071 0.0 1017.0
Hean14g04380 . 39 716 Ion Channels gene family AT5G53130 74.09 0.0 1018.0
Hean13g01613 . 4 633 Ion Channels gene family AT2G28260 56.825 0.0 746.0
Hean13g01709 . 548 715 Ion Channels gene family AT2G25600 34.911 4.72e-16 74.3
Hean13g02471 . 55 361 Ion Channels gene family AT5G55630 53.896 3.80e-110 325.0
Hean13g02736 . 69 720 Ion Channels gene family AT4G30360 64.832 0.0 860.0
Hean12g00387 . 3 717 Ion Channels gene family AT5G57940 75.035 0.0 1101.0
Hean12g00649 . 762 867 Ion Channels gene family AT2G29110 46.729 6.81e-23 93.2
Hean12g00650 . 14 767 Ion Channels gene family AT2G29120 44.948 0.0 711.0
Hean12g00654 . 17 912 Ion Channels gene family AT2G29120 42.366 0.0 728.0
Hean12g00655 . 788 867 Ion Channels gene family AT2G29110 43.21 3.41e-13 63.9
Hean12g00656 . 490 648 Ion Channels gene family AT2G29120 42.222 1.35e-46 169.0
Hean12g00658 . 61 468 Ion Channels gene family AT2G29120 43.826 7.22e-109 341.0
Hean12g00660 . 731 882 Ion Channels gene family AT2G29110 43.949 6.88e-35 128.0
Hean12g00661 . 576 649 Ion Channels gene family AT5G11210 51.351 1.64e-21 84.3
Hean12g00662 . 177 657 Ion Channels gene family AT2G29120 42.363 7.77e-137 416.0
Hean12g00664 . 17 169 Ion Channels gene family AT2G29120 43.791 5.52e-34 125.0
Hean12g00665 . 620 867 Ion Channels gene family AT2G29110 47.431 2.15e-57 198.0
Hean12g00666 . 17 616 Ion Channels gene family AT2G29120 43.044 6.76e-168 501.0
Hean12g00667 . 618 886 Ion Channels gene family AT2G29110 47.826 6.08e-67 224.0
Hean12g00668 . 17 887 Ion Channels gene family AT2G29120 44.743 0.0 743.0
Hean12g01420 . 156 382 Ion Channels gene family AT5G49890 74.009 2.73e-99 310.0
Hean12g02102 . 556 685 Ion Channels gene family AT5G37500 31.111 6.74e-08 53.5
Hean12g02140 . 41 767 Ion Channels gene family AT2G29120 32.341 6.04e-130 407.0
Hean12g02141 . 775 848 Ion Channels gene family AT3G51480 32.0 1.66e-07 46.6
Hean12g02142 WGDA 159 530 Ion Channels gene family AT2G29120 33.681 4.15e-60 207.0
Hean12g02143 . 559 884 Ion Channels gene family AT2G17260 33.639 3.22e-60 207.0
Hean12g02144 WGDA 675 890 Ion Channels gene family AT2G17260 38.532 1.06e-41 150.0
Hean12g02145 . 250 628 Ion Channels gene family AT2G24720 28.351 1.76e-42 155.0
Hean12g02218 . 1 96 Ion Channels gene family AT5G57940 64.286 2.44e-33 119.0
Hean11g00917 . 210 298 Ion Channels gene family AT4G32650 66.292 1.69e-40 139.0
Hean11g01011 . 80 692 Ion Channels gene family AT5G54250 72.727 0.0 924.0
Hean11g01013 . 80 692 Ion Channels gene family AT5G54250 71.336 0.0 910.0
Hean11g01222 . 47 357 Ion Channels gene family AT5G55630 60.486 4.38e-145 413.0
Hean11g01223 ACH 67 303 Ion Channels gene family AT5G55630 56.118 9.12e-91 272.0
Hean11g01858 . 630 732 Ion Channels gene family AT3G17700 61.165 2.00e-38 134.0
Hean11g02845 . 54 357 Ion Channels gene family AT5G55630 51.14 2.36e-114 333.0
Hean11g03267 . 324 473 Ion Channels gene family AT4G35290 47.826 3.82e-35 127.0
Hean11g03268 . 251 295 Ion Channels gene family AT2G17260 64.444 1.25e-15 67.4
Hean11g03269 . 121 192 Ion Channels gene family AT2G17260 62.5 4.12e-27 100.0
Hean11g03277 . 324 473 Ion Channels gene family AT4G35290 47.826 3.82e-35 127.0
Hean11g03278 . 121 192 Ion Channels gene family AT2G17260 62.5 4.12e-27 100.0
Hean11g03633 . 549 622 Ion Channels gene family AT5G11210 43.243 2.31e-14 65.1
Hean10g00743 . 79 404 Ion Channels gene family AT4G01840 55.988 2.37e-124 362.0
Hean10g01536 . 3 730 Ion Channels gene family AT4G03560 65.934 0.0 1007.0
Hean10g01630 . 1 912 Ion Channels gene family AT4G35290 61.623 0.0 1159.0
Hean10g01635 . 28 900 Ion Channels gene family AT4G35290 59.018 0.0 1060.0
Hean10g02008 . 23 795 Ion Channels gene family AT4G22200 65.683 0.0 1062.0
Hean10g02638 . 8 892 Ion Channels gene family AT2G29110 31.626 9.48e-132 416.0
Hean10g02645 . 495 890 Ion Channels gene family AT2G17260 38.653 3.91e-79 261.0
Hean10g02646 WGDA 207 324 Ion Channels gene family AT2G29100 29.167 5.25e-16 74.3
Hean10g02647 . 34 856 Ion Channels gene family AT5G27100 28.114 9.12e-103 337.0
Hean10g02648 . 41 848 Ion Channels gene family AT2G29120 30.769 4.38e-129 408.0
Hean10g02649 WGDA 567 801 Ion Channels gene family AT2G17260 40.928 6.01e-51 180.0
Hean10g02651 . 83 230 Ion Channels gene family AT5G11210 32.215 1.19e-18 80.5
Hean10g02652 . 34 863 Ion Channels gene family AT5G27100 28.74 2.33e-104 341.0
Hean10g02654 . 18 863 Ion Channels gene family AT2G29110 30.594 2.04e-104 343.0
Hean10g02710 . 6 932 Ion Channels gene family AT1G05200 63.355 0.0 1224.0
Hean10g03326 . 3 173 Ion Channels gene family AT2G29100 39.181 6.30e-38 136.0
Hean10g03327 . 250 728 Ion Channels gene family AT5G11180 35.451 1.08e-95 305.0
Hean10g03328 . 762 841 Ion Channels gene family AT2G29110 51.852 1.13e-16 73.2
Hean10g03812 ACH 7 856 Ion Channels gene family AT2G26650 67.128 0.0 1209.0
Hean9g00577 . 546 715 Ion Channels gene family AT3G02850 33.523 4.98e-12 67.4
Hean9g00823 . 492 859 Ion Channels gene family AT1G05200 32.447 1.13e-54 195.0
Hean9g00824 . 495 875 Ion Channels gene family AT2G17260 33.079 4.98e-58 204.0
Hean9g00826 WGDA 494 873 Ion Channels gene family AT2G17260 34.359 1.37e-61 214.0
Hean9g01162 WGDA 11 779 Ion Channels gene family AT5G49890 75.033 0.0 1122.0
Hean9g01208 . 32 235 Ion Channels gene family AT5G15410 58.294 2.66e-73 234.0
Hean9g01209 . 266 450 Ion Channels gene family AT5G15410 60.541 1.75e-68 220.0
Hean9g01211 . 448 726 Ion Channels gene family AT5G15410 66.667 6.31e-127 375.0
Hean9g02190 . 268 778 Ion Channels gene family AT3G27170 76.218 0.0 794.0
Hean9g02191 WGDA 16 778 Ion Channels gene family AT3G27170 76.993 0.0 1214.0
Hean9g02478 . 23 899 Ion Channels gene family AT3G51480 57.303 0.0 1075.0
Hean9g02926 . 125 816 Ion Channels gene family AT5G48410 34.133 3.18e-123 387.0
Hean9g02927 . 54 100 Ion Channels gene family AT3G07520 48.936 1.07e-10 56.2
Hean9g02928 . 23 775 Ion Channels gene family AT5G11210 33.509 1.81e-127 401.0
Hean9g02929 . 46 100 Ion Channels gene family AT3G07520 49.091 1.38e-13 63.5
Hean9g02972 . 59 352 Ion Channels gene family AT5G55630 50.842 5.39e-106 313.0
Hean9g03484 . 21 699 Ion Channels gene family AT5G14870 67.733 0.0 969.0
Hean9g03686 . 156 368 Ion Channels gene family AT5G49890 69.484 1.88e-83 261.0
Hean9g03692 . 156 368 Ion Channels gene family AT5G49890 69.484 1.88e-83 261.0
Hean8g00559 . 597 674 Ion Channels gene family AT3G17700 71.795 1.32e-34 122.0
Hean8g01960 . 4 874 Ion Channels gene family AT2G29120 41.95 0.0 696.0
Hean8g02120 . 74 613 Ion Channels gene family AT3G02850 64.074 0.0 744.0
Hean8g02121 . 615 715 Ion Channels gene family AT5G37500 63.366 1.52e-42 145.0
Hean8g02648 . 1 850 Ion Channels gene family AT3G07520 37.457 0.0 556.0
Hean8g02649 . 43 106 Ion Channels gene family AT3G07520 39.062 1.16e-10 54.7
Hean8g02650 . 198 815 Ion Channels gene family AT5G48410 41.406 5.68e-150 454.0
Hean8g02846 . 61 358 Ion Channels gene family AT5G55630 55.034 5.18e-118 344.0
Hean8g02857 ACH 61 358 Ion Channels gene family AT5G55630 55.034 3.67e-119 347.0
Hean8g03460 . 526 625 Ion Channels gene family AT5G37500 32.0 3.21e-06 47.0
Hean8g03649 . 50 357 Ion Channels gene family AT5G55630 49.675 4.18e-103 306.0
Hean7g00293 . 1 76 Ion Channels gene family AT5G26240 58.228 9.42e-23 88.2
Hean7g00313 . 307 358 Ion Channels gene family AT5G55630 61.538 1.63e-18 75.1
Hean7g00314 . 175 236 Ion Channels gene family AT5G55630 38.71 1.27e-09 50.1
Hean7g00506 . 29 661 Ion Channels gene family AT4G32650 60.28 0.0 766.0
Hean7g00693 . 3 855 Ion Channels gene family AT2G26650 56.751 0.0 1012.0
Hean7g00994 . 461 514 Ion Channels gene family AT3G17690 70.37 2.00e-20 80.1
Hean7g01232 . 3 888 Ion Channels gene family AT3G51480 57.783 0.0 1087.0
Hean7g01963 ACH 50 188 Ion Channels gene family AT2G28260 49.286 2.82e-42 153.0
Hean7g01964 . 190 637 Ion Channels gene family AT2G28260 56.027 0.0 566.0
Hean7g02090 . 628 685 Ion Channels gene family AT5G27100 46.552 2.60e-12 59.7
Hean7g02103 ACH 548 727 Ion Channels gene family AT4G32500 31.863 3.82e-18 86.3
Hean7g02196 . 7 857 Ion Channels gene family AT2G26650 67.011 0.0 1194.0
Hean7g02651 . 444 526 Ion Channels gene family AT2G24710 40.964 3.27e-14 63.9
Hean7g03248 . 5 716 Ion Channels gene family AT5G53130 74.687 0.0 1092.0
Hean6g01933 . 98 196 Ion Channels gene family AT5G49890 74.747 3.21e-39 149.0
Hean6g02222 . 146 816 Ion Channels gene family AT5G48410 36.522 8.35e-141 432.0
Hean6g02223 . 67 771 Ion Channels gene family AT5G11210 34.401 6.28e-130 402.0
Hean6g02225 ACH 633 844 Ion Channels gene family AT3G07520 36.607 2.03e-35 130.0
Hean6g02290 ACH 5 857 Ion Channels gene family AT2G26650 64.619 0.0 1167.0
Hean6g02337 . 7 765 Ion Channels gene family AT5G33280 72.332 0.0 1103.0
Hean6g02400 . 1 717 Ion Channels gene family AT5G57940 76.966 0.0 1137.0
Hean6g02527 . 4 730 Ion Channels gene family AT4G03560 60.66 0.0 900.0
Hean6g02767 ACH 11 779 Ion Channels gene family AT5G49890 76.593 0.0 1171.0
Hean6g03472 . 20 903 Ion Channels gene family AT1G42540 64.189 0.0 1207.0
Hean5g00647 . 1 719 Ion Channels gene family AT4G30360 66.397 0.0 996.0
Hean5g00657 ACH 490 873 Ion Channels gene family AT2G17260 32.061 2.15e-53 192.0
Hean5g01084 . 554 723 Ion Channels gene family AT3G02850 33.333 5.94e-12 67.0
Hean5g01119 . 7 765 Ion Channels gene family AT5G33280 72.859 0.0 1123.0
Hean5g02395 . 100 848 Ion Channels gene family AT2G29120 30.468 5.75e-105 343.0
Hean5g03493 ACH,WGDA 86 365 Ion Channels gene family AT5G40890 24.573 8.80e-06 47.4
Hean4g00257 . 1 86 Ion Channels gene family AT5G26240 61.798 1.27e-29 108.0
Hean4g00899 . 16 704 Ion Channels gene family AT3G48010 61.014 0.0 870.0
Hean4g00977 . 120 330 Ion Channels gene family AT5G55630 36.967 7.11e-32 114.0
Hean4g01735 . 357 813 Ion Channels gene family AT5G48410 39.875 8.70e-104 328.0
Hean4g02932 WGDA 1 677 Ion Channels gene family AT5G46240 54.449 0.0 793.0
Hean4g04464 . 14 902 Ion Channels gene family AT2G32400 52.455 0.0 973.0
Hean4g04465 . 54 932 Ion Channels gene family AT1G05200 64.786 0.0 1202.0
Hean3g00594 . 1 717 Ion Channels gene family AT5G57940 76.06 0.0 1128.0
Hean3g00718 ACH,WGDA 384 778 Ion Channels gene family AT5G11210 33.907 6.03e-59 206.0
Hean3g00918 . 670 717 Ion Channels gene family AT5G57940 65.306 1.96e-15 66.2
Hean3g01093 . 680 708 Ion Channels gene family AT2G17260 68.966 1.09e-06 45.4
Hean3g01162 . 1 791 Ion Channels gene family AT5G26240 80.125 0.0 1206.0
Hean3g01239 ACH,WGDA 6 779 Ion Channels gene family AT5G49890 76.873 0.0 1176.0
Hean3g01357 . 46 726 Ion Channels gene family AT5G15410 72.78 0.0 991.0
Hean3g01428 . 87 298 Ion Channels gene family AT4G32650 57.534 4.35e-70 224.0
Hean3g02467 . 77 692 Ion Channels gene family AT5G54250 76.861 0.0 983.0
Hean3g02979 . 1 725 Ion Channels gene family AT2G24610 65.4 0.0 977.0
Hean3g03255 . 56 931 Ion Channels gene family AT1G05200 61.721 0.0 1135.0
Hean3g04193 . 523 636 Ion Channels gene family AT5G53130 76.316 6.84e-59 191.0
Hean3g04367 . 1 713 Ion Channels gene family AT5G53130 62.483 0.0 892.0
Hean2g00254 . 354 709 Ion Channels gene family AT1G15990 75.275 0.0 544.0
Hean2g00255 . 204 378 Ion Channels gene family AT5G57940 54.857 3.78e-64 208.0
Hean2g00256 . 83 214 Ion Channels gene family AT1G19780 70.455 2.32e-61 199.0
Hean2g00259 . 39 730 Ion Channels gene family AT4G30560 65.374 0.0 962.0
Hean2g02583 . 50 636 Ion Channels gene family AT2G28260 58.773 0.0 734.0
Hean2g03006 . 1 678 Ion Channels gene family AT2G28260 69.35 0.0 1005.0
Hean1g00457 . 535 587 Ion Channels gene family AT4G35290 51.852 9.37e-13 59.7
Hean1g01713 . 39 385 Ion Channels gene family AT5G48410 34.085 1.80e-60 207.0
Hean1g01715 . 512 829 Ion Channels gene family AT5G48410 33.939 1.63e-48 173.0
Hean1g01716 . 382 470 Ion Channels gene family AT5G11210 40.449 2.74e-18 77.8
Hean1g01717 ACH 627 829 Ion Channels gene family AT3G07520 35.814 1.51e-35 133.0
Hean1g01718 . 46 103 Ion Channels gene family AT3G07520 50.0 5.20e-14 65.9
Hean1g01721 . 100 829 Ion Channels gene family AT5G48410 35.867 1.64e-144 443.0
Hean1g01722 . 462 828 Ion Channels gene family AT3G07520 38.522 2.92e-74 247.0
Hean1g01723 . 145 815 Ion Channels gene family AT2G24720 38.45 3.19e-158 479.0
Hean1g01724 . 45 100 Ion Channels gene family AT3G07520 48.214 1.04e-12 60.8
Hean1g01725 . 145 631 Ion Channels gene family AT2G24720 39.192 6.23e-112 350.0
Hean1g01726 . 627 819 Ion Channels gene family AT3G07520 42.574 1.33e-45 160.0
Hean1g01963 . 22 431 Ion Channels gene family AT4G18160 63.876 5.42e-177 499.0
Hean1g03122 . 91 909 Ion Channels gene family AT4G35290 57.927 0.0 974.0
Hean1g03126 . 640 772 Ion Channels gene family AT4G35290 69.173 2.29e-59 196.0
Hean1g03127 . 91 629 Ion Channels gene family AT4G35290 59.555 0.0 664.0
Hean1g03128 . 30 91 Ion Channels gene family AT4G35290 46.774 4.02e-14 65.1
Hean1g03134 . 640 771 Ion Channels gene family AT4G35290 71.212 3.98e-61 200.0
Hean1g03135 . 30 629 Ion Channels gene family AT4G35290 57.571 0.0 715.0