Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00460 | ATGCATTCATTCGGATACAGAGCGAACGCTTTGCTGACTTTTGCTATTACGATACTTGCCGTAATGTGCGCCATCGCATCCCTCTCCGACAATTTCACTTCTCCCCATCCCTCCTCCAAAGTCCAGGTTCTAAACATCAATTGGTTCCGGAATAAGCCAGATGGCGATGATGAGGTCAGCATGACGATGAACATATCAGCAGATTTGCAGTCATTGTTTACATGGAATACAAAACAGGTTTTCGTTTTTCTAGCTGCTGAGTATGAAACCCCACAGAATTCTTTAAATCAGGTTTCCTTGTGGGATGGTATTATTCCTGCCAAAGAGCATGCAAAGTTCTACATCCATACAACCAACAAATACCGATTTGTAGATCAGGGAAGTAATCTCCGAGGAAGAGATTTCAACATGACATTGCATTGGCATGTGATGCCCAAAACTGGGAAGATGTTTGCTGACAAAATAGTCATGACCGGGTTCCGCTTACCTCAATCATATAGATGA | 504 | 42.86 | MHSFGYRANALLTFAITILAVMCAIASLSDNFTSPHPSSKVQVLNINWFRNKPDGDDEVSMTMNISADLQSLFTWNTKQVFVFLAAEYETPQNSLNQVSLWDGIIPAKEHAKFYIHTTNKYRFVDQGSNLRGRDFNMTLHWHVMPKTGKMFADKIVMTGFRLPQSYR | 167 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00460 | 167 | PIRSF | SPC3 | 1 | 167 | IPR007653 | GO:0005787(InterPro)|GO:0006465(InterPro)|GO:0016020(InterPro) | |
| Hean1g00460 | 167 | Pfam | Signal peptidase subunit | 1 | 164 | IPR007653 | GO:0005787(InterPro)|GO:0006465(InterPro)|GO:0016020(InterPro) | |
| Hean1g00460 | 167 | PANTHER | MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22-23 | 1 | 167 | IPR007653 | GO:0005787(PANTHER)|GO:0005787(InterPro)|GO:0006465(PANTHER)|GO:0006465(InterPro)|GO:0016020(InterPro)|GO:0045047(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00460 | K12948 | signal peptidase complex subunit 3 [EC:3.4.-.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr1:15935804 | Hean2g02251 | Hean-Chr2:139100161 | dispersed | |
| Hean | Hean-Chr1:15935804 | Hean15g02804 | Hean-Chr15:92052059 | transposed | |
| Hean | Hean-Chr1:15935804 | Hean14g02431 | Hean-Chr14:128832562 | transposed |