AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00466 ATGTCTCCAGTGAGTGTAATAGACAACGAAGTTGATATTCTAATTGGTGCTTTCCGCTCTGATCTAACGTCTTTCATGGAAGAATGGAGATCGATATTTTCTCGATTTCATTTGATAGTTGTGAAAGATCCTGATGTTAAAGAATTTAAAATTCCTGTGGGATTTGATGTTCGTGTTTACACCGAGTCGGACATAGTCAAAGTGGTCGGGTCTTCTAAACCTTCTTTGTTTTCTGGATACTCATCTCGCTACTTTGGCTATCTTCCCAGCCAAAACATCTTAACAACCTTGAACACACCCGCAACTCCTTTCTTTTTCAACACACTCTATGACCCGTATCAAAAGGGATCTCACTTCGTTCGTGGGTACCCATTTAGCTTACGTAGCGGGGTCCCGTGTGCTCTTTCGTGCGGTCTTTGGCTTAATTTTGCAGACTATGATGCACCAACACAAGCGCTCAAACCAGATATGAGAAATACAAGGTATGTTGATGCTGTTTTGACAGTACCACTGAAGTCAATGATGCCGATGAGTGGAGTCAACATAGCGTTTGTCCGAGAACTGGTGGGTCCTGCTATGTTACCTGCTTTGAAGCTGGTGAAGGAAGGGGAAGTGAGGTGGGAAACGATGGAGGATGTATGGTGCGGGCTTGTCGTGAAAACGGTTTGCGATCACTTGAAACTGGGTGTGAAAAGTGGAATCCCATATGTTTGGAGGAATGAAAAGGGAAGTGCTATTGACAGTTTAAAGAAAGAATGGGAAGGAGTGAAGCTGATGGAGGATGCAGTGCTGTTTGTTGAGACATTAAGGCTGTCTCCGTCGTCAGTGACGGCTGTGGATTGTGTGTTGGAGATTGCTGTTGCGGTGAAGGAACGGCTGGGATCGACACATGCGGTTTTTGTCAGTGCTGCTGAGGCCATGGTCGAATGGGTGAAGCTCTGGAAGGCAGTCCAGTCATTGGATCACTGA 969 45.51 MSPVSVIDNEVDILIGAFRSDLTSFMEEWRSIFSRFHLIVVKDPDVKEFKIPVGFDVRVYTESDIVKVVGSSKPSLFSGYSSRYFGYLPSQNILTTLNTPATPFFFNTLYDPYQKGSHFVRGYPFSLRSGVPCALSCGLWLNFADYDAPTQALKPDMRNTRYVDAVLTVPLKSMMPMSGVNIAFVRELVGPAMLPALKLVKEGEVRWETMEDVWCGLVVKTVCDHLKLGVKSGIPYVWRNEKGSAIDSLKKEWEGVKLMEDAVLFVETLRLSPSSVTAVDCVLEIAVAVKERLGSTHAVFVSAAEAMVEWVKLWKAVQSLDH 322
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00466 322 PANTHER UDP-ARABINOSE MUTASE 3 91 IPR037595 GO:0005794(PANTHER)|GO:0005829(PANTHER)|GO:0009832(PANTHER)|GO:0033356(PANTHER)|GO:0052691(PANTHER)
Hean1g00466 322 Pfam Reversibly glycosylated polypeptide 8 91 IPR037595 -
Hean1g00466 322 Pfam Reversibly glycosylated polypeptide 94 318 IPR037595 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00466 K13379 reversibly glycosylated polypeptide / UDP-arabinopyranose mutase [EC:2.4.1.- 5.4.99.30]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:16654052 Hean8g02071 Hean-Chr8:66636685 dispersed
Hean Hean-Chr1:16654052 Hean4g00735 Hean-Chr4:20185738 transposed