Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00472 | ATGTCATTCAAGGAGTTTCAAGACTGTAAGGCACTCCTTGATATGCTGGATGATGAAGAGTATGTTATGAAATACAAGTATTATCTCGAAAACAAGTTTAATGATATGGTTGATTGGTTTCTCAAGGAGAAATTAGAAATCACCACAAGACCACTACTTGCGTATGCATCGGACAACCGAAAAATATGTCTCTTAGACCTGTACATGGCTGTCAAAAAAGAGAGTGGACACCGAAGGATTACTGAAAACAATATGTGGGCAATGATTGCCAAGGATCTAGGTTTTGATTATGATGATGGAGAGTATTTGAGGCTGATATATGCTATGTATTTGGACGTGCTGATTTACCATTATAAAAACAAGTCAACTCAAGAAAAGGTGCATGAGAAAGAGGAGGTCAAGACGGTGGTTGATCCAAGACGAAGCAGGAGTGAAGAAGACAGAATGTTAGGAAATGAAGCATATCAATCGGAAGGCAACTCAAAGAATGAAGATACTGCTGGGAAGGAGACTGAGCACTACGCGTTTTTCGCCGGCAACGATTGGCAAGGAATCAAAAGGCTGCATACTAGGAGGAGGTTCAACTTCAATCGAGCAAAAGCAGCCGTGGATGATGCCAACAAAAGTGTGTTAATGCACTCTCACAAACATAATTATGTTTAG | 663 | 40.27 | MSFKEFQDCKALLDMLDDEEYVMKYKYYLENKFNDMVDWFLKEKLEITTRPLLAYASDNRKICLLDLYMAVKKESGHRRITENNMWAMIAKDLGFDYDDGEYLRLIYAMYLDVLIYHYKNKSTQEKVHEKEEVKTVVDPRRSRSEEDRMLGNEAYQSEGNSKNEDTAGKETEHYAFFAGNDWQGIKRLHTRRRFNFNRAKAAVDDANKSVLMHSHKHNYV | 220 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00472 | 220 | Gene3D | - | 19 | 137 | IPR036431 | GO:0003677(InterPro) | |
| Hean1g00472 | 220 | MobiDBLite | consensus disorder prediction | 135 | 152 | - | - | |
| Hean1g00472 | 220 | Pfam | ARID-BRIGHT DNA binding domain | 34 | 111 | IPR001606 | GO:0003677(InterPro) | |
| Hean1g00472 | 220 | ProSiteProfiles | ARID domain profile. | 27 | 119 | IPR001606 | GO:0003677(InterPro) | |
| Hean1g00472 | 220 | CDD | ARID | 30 | 111 | - | - | |
| Hean1g00472 | 220 | SUPERFAMILY | ARID-like | 56 | 114 | IPR036431 | GO:0003677(InterPro) | |
| Hean1g00472 | 220 | PANTHER | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 | 1 | 156 | - | - | |
| Hean1g00472 | 220 | MobiDBLite | consensus disorder prediction | 135 | 167 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00472 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr14:118153122 | Hean1g00472 | Hean-Chr1:16719576 | dispersed | |
| Hean | Hean-Chr1:16719576 | Hean6g01642 | Hean-Chr6:41088600 | dispersed | |
| Hean | Hean-Chr1:16719576 | Hean1g03716 | Hean-Chr1:146171029 | transposed |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Hean | ARID | 1.1e-07 | CL0123 | TR | ARID |