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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00474 ATGAGCAAGGAGAGGTTGGCGGGGCTGGCTCAGCAGCTCCGGATTTACAAGGTACCGGTGGCGGCTGATGATGATGATGACGATGCAGTGGGTCAGCCCTCAGAAGGATTCAGACCTAAGAAAGCGGTTGTTTTGATCTGCCTTTTCGAACAAAATAATAATGAGGGGATTCGCGTGATTCTTACCAAAAGATCTTCTCGCCTCTCCACACATTCAGGTGAAGTCGCTTTGCCTGGAGGGAAGGCCGAGGAAGATGACGTAGATGACGCTGACACAACCACTAGGGAAGCACACGAAGAGATTGGTCTCCATCCTTCCCTCGTAGATGTTCATCTTCTGCGGGTAATCCCTGTAATTGGCATACTTTCTGACAGAGATGCCTTCAATCCTACTCCTAATGCTGCTGAAGTAGATGACGTCTTTGATGCTCCTTTGGAAATGTTTCTAAAGGATGAAAACCGAAGATCTGAAAAAGAGAGAATGGATGGGAGAGGAGTATCTGGTTCATTATTTTGA 516 47.29 MSKERLAGLAQQLRIYKVPVAADDDDDDAVGQPSEGFRPKKAVVLICLFEQNNNEGIRVILTKRSSRLSTHSGEVALPGGKAEEDDVDDADTTTREAHEEIGLHPSLVDVHLLRVIPVIGILSDRDAFNPTPNAAEVDDVFDAPLEMFLKDENRRSEKERMDGRGVSGSLF 171
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00474 171 CDD CoAse 40 158 IPR045121 GO:0010945(InterPro)
Hean1g00474 171 SUPERFAMILY Nudix 35 152 IPR015797 -
Hean1g00474 171 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 23 169 - -
Hean1g00474 171 FunFam Nudix hydrolase 11 22 171 - -
Hean1g00474 171 Pfam NUDIX domain 42 147 IPR000086 -
Hean1g00474 171 ProSiteProfiles Nudix hydrolase domain profile. 39 165 IPR000086 -
Hean1g00474 171 PANTHER NUDIX HYDROLASE 2 159 IPR045121 GO:0010945(InterPro)|GO:0015938(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00474 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:16777818 Hean1g00476 Hean-Chr1:16789940 proximal