AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00507 ATGAACATCCTACATCTATTCATCATCTTTCTTTGCAATACAATCCACATAGATATATATATTTCGTGTCAAGAAAACATGATGGGAGTCTTCAAGAATGGGTTGGTGAGTGCACCAAAAGAACTGAATAGCCCATCATCCTCTTTCCATCAACACGAAGAAGATCAAGATCAACATCCCTTGAAGCATTTCTTGAAATCCTACACCAATGCGTTCTCGATTTCGTTCGGAAATGATGTTTCTTTGGCTCTTGATCCTTCTTCTCAGGTCCAGTTACCACAACAAAGGTTGTTTTGTAGCATGGATGACATTTACTGCATATTCTTGGGGGGTTTAAACAACTTGTGCACCCTTAACAAGCAATATGGGTTAACAAAGGTAGCTAATGAACCCATGTTTGTGATACAAGCTTACAAGACCCTCCGAGACCGTGGTCCATATCCGGCTCATTCGGTTCTCAAAGAGCTTGATGGGAGTTTCGGGTTTATACTCTATAATGTCATGTCTAAAACTGTCTTTGTATCACTTGGTGCAAATGGGGAAGTAAAGCTCTTCTGGGGCATAGCAGCTGATGGCTCTGTGGTAATTTCTGACAACTTGGTGGCCATTAAGTCTAGCTGCTCCAAGTCATTTGCTCCCTTCCCAACCGGATGCATGTACCATACAGAAGGAGGGCTGATAAGCTTTGAGCATCCAAAGAAGAAGATGAAGGCAATTTCAAGGGTTGATAGTGAGGGCATAATGTGTGGTGCCACATTCAAAGTTGATATGTATTCAAAGACCCAAACTATGCCAAGGGTTGGAAGTGAAGCTAATTGGGCTACTTGGGGCGTTTGA 837 42.29 MNILHLFIIFLCNTIHIDIYISCQENMMGVFKNGLVSAPKELNSPSSSFHQHEEDQDQHPLKHFLKSYTNAFSISFGNDVSLALDPSSQVQLPQQRLFCSMDDIYCIFLGGLNNLCTLNKQYGLTKVANEPMFVIQAYKTLRDRGPYPAHSVLKELDGSFGFILYNVMSKTVFVSLGANGEVKLFWGIAADGSVVISDNLVAIKSSCSKSFAPFPTGCMYHTEGGLISFEHPKKKMKAISRVDSEGIMCGATFKVDMYSKTQTMPRVGSEANWATWGV 278
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00507 278 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 52 229 IPR029055 -
Hean1g00507 278 Pfam Aluminium induced protein 29 255 IPR024286 -
Hean1g00507 278 PANTHER ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS 27 276 IPR044828 -
Hean1g00507 278 SMART DUF3700-2 28 255 IPR024286 -
Hean1g00507 278 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 97 228 IPR029055 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00507 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr10:163608936 Hean1g00507 Hean-Chr1:20180291 dispersed
Hean Hean-Chr16:102208572 Hean1g00507 Hean-Chr1:20180291 dispersed
Hean Hean-Chr16:102209525 Hean1g00507 Hean-Chr1:20180291 dispersed
Hean Hean-Chr1:20180291 Hean8g02997 Hean-Chr8:110746132 dispersed
Hean Hean-Chr1:20180291 Hean1g00509 Hean-Chr1:20302564 proximal
Hean Hean-Chr1:20180291 Hean1g00508 Hean-Chr1:20302278 tandem