AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00517 ATGGGTCCTATACGCAGATTCCTGTTATTCTCCATCGTCTTCTTTGCATCGGTGGTTATTGCGGCGGAAATCGCCGTTCCGTTGGTGTTGAACTTTGATTTCCCGGCGGCGGTTTGTTCAGCTCTCAAACCAGCGTACCTCTACCTGCTCATCAACATTATCATTCTCACAATCTCAGCCACCTCATATCAAGAGAACCAGTCACAGCCGATTCAACAGAGTTTTGGCCTTTTCGACAGTGTACACCAGGAGCCGATTGTCGTACGTGTGGAGGAGGAGATTCTGCCAGCCAGAGAAAAACCGGTAGTTGATTCCCGATTTGCTCAATGGAAACGGATAAAAACCAGTCCGGATGATGGTGCTAGAGCCCTAAAGGTGGCGACGGAGGTTGCAGGGGAAGACGGCGGGTTTACCAACGGCTGCCGTCAGACGCCGCTCAAGAAATCAAAGACATTCGAGAACAATGAAATGAAAATGGCTGCAGGGATTAAGAAAAAGAAGGTGGTTAGGAAATCTGTGACCCTCAAAGATCGCACAAACTACGACGACAAAAACCACCCTCCTTCGTCGCCGGACTCCGCTGGAAACCGGAGGAAAGATGGGTCACTGAGTAACGACGAGTTGAACCAGCGAGTTGAAGAATTTATAAAAAAGTTTAATAACCAAATGAGGCTGCAAAGACAAACTCTGTCTGTGAAGCAGTACAGAGCCTTGACCAACCCCCGTTAG 729 48.7 MGPIRRFLLFSIVFFASVVIAAEIAVPLVLNFDFPAAVCSALKPAYLYLLINIIILTISATSYQENQSQPIQQSFGLFDSVHQEPIVVRVEEEILPAREKPVVDSRFAQWKRIKTSPDDGARALKVATEVAGEDGGFTNGCRQTPLKKSKTFENNEMKMAAGIKKKKVVRKSVTLKDRTNYDDKNHPPSSPDSAGNRRKDGSLSNDELNQRVEEFIKKFNNQMRLQRQTLSVKQYRALTNPR 242
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00517 242 Pfam Cotton fibre expressed protein 206 236 IPR008480 -
Hean1g00517 242 Pfam Domain of unknown function (DUF4408) 38 62 IPR025520 -
Hean1g00517 242 PANTHER COTTON FIBER (DUF761) 23 229 - -
Hean1g00517 242 MobiDBLite consensus disorder prediction 174 206 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00517 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:20613383 Hean4g04210 Hean-Chr4:202090439 dispersed