Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00518 | ATGCCTCCTCGACGCGACAATCAGATGGCGAATGCCGAACTGGCGGAAATCATCGCGCAACAAATGGCTGCTGCCTTCCCAATTCTTTATGCTCAAATAACTCAAGCCATCAACAACAACAATGCTCCATGCAATTTCAAGGTTTTTAACTCAGCTAAACCGCTCAAGTTCAATGGTTCTGAGGGAGCAACTGGTCTTCTTCAATGGTTCGAGAGCATTGAGAATACTTTCCGTCACGTTCAGTGTCCTGAAAATCGCAAGGTCGAGTTTTCTTCGAGTGTGTTTCAGAAGAGGGCTCTTACATGGTGGAACGGGGTTATGAGAGACCGCGGTGCAGAGGTTGCATTAGCACAGACTTGGGCCGAGCTTAGGGCTCTTATGATGAAGGAGTTCTGTCCTCGTCATGAGCTTAGGGCTCTAGAAAGGGAATTTGATGATTTAAAGCAAGACAGTGGGGAACATCGAGCCTATACTGATCGCTATGAGGAATTGAGCTTGTTATGCCCTACTATGGTTACGCCTCTGGATAAGGCGATTGAGAAATACATTGATGGACTTCCTGACGTAGTTCAGGACATCGTTACTGGCAGCAACCCTACTACTGTCAGACAAGCCATTGAATTGGCTGCCACTCTGACTGAATCCCAAATCAGGAAGCACAAGCTGTTTCGGAAGGGCGACTTAAGACCATCTGACAAGACTGCTCATGTGGAAACAAAGGAAGAAAGTACTGAGGTGCCCAAGAAGAAAAAGCGCAAAGCCTCTCAAAGCTACGCTGTAACTGCTCAAGACAAACAAGTTGCACCAAACCAGCCAACACAACCTCGTAAAAGACAAAACTATGTTGGTACTGCACCGTTGTGCAACAAATGCAACCGTCATCATCTAGAGCAAGAGCAGTGTCACAAATGTACCCACTGTGGGCGGTTGGGACATTTGATCAATGTTTGTCGTTATGCAAATCAAGCTGCTGCAAACCCTGCTGCTGTTCAAGCACGGTTCCCCCCAGGGTCATGTTATAACTGTGGTGACCTTACCCACTACAGGAACAATTGCCCAAGGCTTGTTAACATACCTCCAGCGCGTGGACGAGTGTTCAACATCAATGAGGCAAACATGAACAATGATGCAGCAGTGAACAATTAG | 1146 | 46.95 | MPPRRDNQMANAELAEIIAQQMAAAFPILYAQITQAINNNNAPCNFKVFNSAKPLKFNGSEGATGLLQWFESIENTFRHVQCPENRKVEFSSSVFQKRALTWWNGVMRDRGAEVALAQTWAELRALMMKEFCPRHELRALEREFDDLKQDSGEHRAYTDRYEELSLLCPTMVTPLDKAIEKYIDGLPDVVQDIVTGSNPTTVRQAIELAATLTESQIRKHKLFRKGDLRPSDKTAHVETKEESTEVPKKKKRKASQSYAVTAQDKQVAPNQPTQPRKRQNYVGTAPLCNKCNRHHLEQEQCHKCTHCGRLGHLINVCRYANQAAANPAAVQARFPPGSCYNCGDLTHYRNNCPRLVNIPPARGRVFNINEANMNNDAAVNN | 381 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00518 | 381 | PANTHER | LDOC1 RELATED | 36 | 275 | IPR032567 | - | |
| Hean1g00518 | 381 | MobiDBLite | consensus disorder prediction | 223 | 279 | - | - | |
| Hean1g00518 | 381 | Gene3D | - | 297 | 355 | - | - | |
| Hean1g00518 | 381 | MobiDBLite | consensus disorder prediction | 223 | 252 | - | - | |
| Hean1g00518 | 381 | ProSiteProfiles | Zinc finger CCHC-type profile. | 339 | 354 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Hean1g00518 | 381 | SUPERFAMILY | Retrovirus zinc finger-like domains | 332 | 358 | IPR036875 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Hean1g00518 | 381 | Pfam | Retrotransposon gag protein | 93 | 187 | IPR005162 | - | |
| Hean1g00518 | 381 | SMART | c2hcfinal6 | 303 | 319 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Hean1g00518 | 381 | SMART | c2hcfinal6 | 338 | 354 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Hean1g00518 | 381 | MobiDBLite | consensus disorder prediction | 256 | 279 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00518 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr1:20722074 | Hean2g01491 | Hean-Chr2:86559788 | dispersed | |
| Hean | Hean-Chr1:20722074 | Hean4g02117 | Hean-Chr4:103333446 | transposed |