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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00533 ATGAATGAGGAAACCTGGAAGGAATATTGCAAACAACTGGAACATCGCCTAGAGGCTACAATGCAAAGTAAAATTCACGTTTATGAAAGCGGGAGGGCTGAACAGAAGTATGATCCTGATCTCCCCCCAGAGCTAGCTGCAGCAGCAGGTCATGATATCTCATCTGAAAACCGTAACTTTGGAAAAGTTGATGTGCAAAGTGACTTAGCTAAGGGGTCTGTACACTCTCCGATGCAATTGATGACTAAGGAGTCAATATATTACAAAACAACATCTAACGTCTTTTGTAAGCCAATCATAGACGAATATAGAGACATGATGATGGCGAGCACCATTTGTAATCTTGAGTACATTCAACAATAA 363 40.77 MNEETWKEYCKQLEHRLEATMQSKIHVYESGRAEQKYDPDLPPELAAAAGHDISSENRNFGKVDVQSDLAKGSVHSPMQLMTKESIYYKTTSNVFCKPIIDEYRDMMMASTICNLEYIQQ 120
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00533 120 PANTHER FIP1[III]-LIKE PROTEIN 1 79 IPR044976 GO:0006397(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00533 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr12:6635086 Hean1g00533 Hean-Chr1:24238701 dispersed
Hean Hean-Chr1:24238701 Hean10g03618 Hean-Chr10:172536499 transposed