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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00540 ATGAAGCTGTTGAGTAGCTTGTACCAAAGAAAGGTTTTGCCATCTCCTGTTGCACAGCATGCTCTTCATAGAGGTTTCCCTGCAGATCTCATTTTCACACCTGTTAAAGCCAGTGAGCCACGGGAGAGTGAGTTCATCGATTCACAGCGCGTTTGGGCTGAATACGCTCTCAAGAGGCAGGAAGCTCAGTCGCAAAACAGGCGTTTAAAACTTGAAGATTTGGAAGTGAGCTTTGCTTTTGCATATATTAACATGTGTTAA 261 44.44 MKLLSSLYQRKVLPSPVAQHALHRGFPADLIFTPVKASEPRESEFIDSQRVWAEYALKRQEAQSQNRRLKLEDLEVSFAFAYINMC 86
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00540 86 PANTHER PRE-MRNA SPLICING FACTOR PRP8 38 78 IPR027652 GO:0000244(PANTHER)|GO:0000398(InterPro)|GO:0005681(InterPro)|GO:0005682(PANTHER)|GO:0017070(PANTHER)|GO:0030619(PANTHER)|GO:0030620(PANTHER)|GO:0030623(PANTHER)|GO:0071013(PANTHER)|GO:0097157(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00540 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:24959429 Hean4g00356 Hean-Chr4:9206248 dispersed