Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00637 | ATGGCAGCATCCGCCATGGACGGCGTTGCTGCGACGGCGCTCCGGTCAGTTCTTCAACGCGTGAAACAAGCAGCCGAAAGATCATCTCGTGCATCCGATCGGATAAGAGTAGTCGCAGTGAGCAAAACAAAGCCCGTTTCACTCCTCCGAGAAGTATACGACACCGGTCACCGGTGTTTCGGTGAAAATTACGTTCAGGAAATCGTTGAAAAAGCACCTCAGCTTCCTGAAGATATAGAGTGGCATTTTATTGGAAATTTGCAGAGTAACAAAGTGAAGCCTCTGTTGACTGGGGTACCGAATCTTGCCATGGTGGAGACTGTAGATGATGAAAAGATTGCAAATAATCTTGATCGAGTTATTGGGAACATTGGCAGGAAGCCTTTGAAGGTGTTGGTCCAGGTGAATACAAGTGGAGAAACATCAAAATTCGGAGTTGACCCCGATGGGTGCTTGGCGCTTGTGAAACATGTTACTTCAAACTGCCCGAACCTTGAGTTTTGTGGCTTAATGACCATTGGGATGCCAGATTATACTTCAACTCCAGAGAACTTCAAGACATTAGCCAATTGCAGAACGGAGGTATGCAATGCTCTTGAAATACCTGAGGAGCAATGCGAACTGTCAATGGGCATGTCTGGTGACTTTGAGCTAGCTATTGAAATGGGCAGTACCAATGTGAGAGTCGGATCTACCATTTTTGGAGCAAGGGAGTACCCAAAAAAACAATGA | 732 | 46.31 | MAASAMDGVAATALRSVLQRVKQAAERSSRASDRIRVVAVSKTKPVSLLREVYDTGHRCFGENYVQEIVEKAPQLPEDIEWHFIGNLQSNKVKPLLTGVPNLAMVETVDDEKIANNLDRVIGNIGRKPLKVLVQVNTSGETSKFGVDPDGCLALVKHVTSNCPNLEFCGLMTIGMPDYTSTPENFKTLANCRTEVCNALEIPEEQCELSMGMSGDFELAIEMGSTNVRVGSTIFGAREYPKKQ | 243 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00637 | 243 | Gene3D | Alanine racemase | 2 | 243 | IPR029066 | - | |
| Hean1g00637 | 243 | FunFam | Pyridoxal phosphate homeostasis protein | 2 | 243 | - | - | |
| Hean1g00637 | 243 | Pfam | Alanine racemase, N-terminal domain | 26 | 237 | IPR001608 | - | |
| Hean1g00637 | 243 | NCBIfam | YggS family pyridoxal phosphate-dependent enzyme | 14 | 237 | IPR011078 | GO:0030170(InterPro) | |
| Hean1g00637 | 243 | CDD | PLPDE-III-YBL036c-euk | 14 | 235 | - | - | |
| Hean1g00637 | 243 | PANTHER | PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN | 7 | 240 | IPR011078 | GO:0005622(PANTHER)|GO:0030170(PANTHER)|GO:0030170(InterPro) | |
| Hean1g00637 | 243 | Hamap | Pyridoxal phosphate homeostasis protein. | 12 | 236 | IPR011078 | GO:0030170(InterPro) | |
| Hean1g00637 | 243 | PIRSF | YBL036c-PLPDEIII | 1 | 243 | IPR011078 | GO:0030170(InterPro) | |
| Hean1g00637 | 243 | ProSitePatterns | Uncharacterized protein family UPF0001 signature. | 81 | 95 | IPR011078 | GO:0030170(InterPro) | |
| Hean1g00637 | 243 | SUPERFAMILY | PLP-binding barrel | 12 | 235 | IPR029066 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00637 | K06997 | PLP dependent protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr10:154226491 | Hean1g00637 | Hean-Chr1:32652430 | dispersed | |
| Hean | Hean-Chr16:176185258 | Hean1g00637 | Hean-Chr1:32652430 | dispersed | |
| Hean | Hean-Chr1:32652430 | Hean4g00446 | Hean-Chr4:12130152 | dispersed |