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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean4g04326 ATGCAGCAAAAGATTGTGGTGAAGGTGAGCATGAACGGCGACAAGAAAACCCGTAAAGCTCTTAAGATCGCGGTTAGTATATCTGGAGTTGAATCCGCGTCTTTCGTTGGGTCAGATAAAGACCAGATAGCGGTGACCGGTGAAGGTATAGACTCGGTTGAACTAACAACCTTACTAAGAAAAAAGGTTGGATACACGGAGCTGGTAAGCGTTGGTCCGGTGGAGGCGAAGAAAGACGAACCAAAGCCCACCGTGCAAATTGATCCTTATCAGTACTACTATCAAAGCTATGGCGTGCCCTATTATTATTATGTATATTAG 321 44.86 MQQKIVVKVSMNGDKKTRKALKIAVSISGVESASFVGSDKDQIAVTGEGIDSVELTTLLRKKVGYTELVSVGPVEAKKDEPKPTVQIDPYQYYYQSYGVPYYYYVY 106
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean4g04326 106 Gene3D - 1 76 - -
Hean4g04326 106 PANTHER OS04G0464100 PROTEIN 3 84 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean4g04326 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402144 Hean11g00695 Hean4g04326
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:14220366 Hean4g04326 Hean-Chr4:203833111 dispersed
Hean Hean-Chr4:203812253 Hean4g04326 Hean-Chr4:203833111 dispersed
Hean Hean-Chr4:203833111 Hean4g04328 Hean-Chr4:203856263 dispersed
Hean Hean-Chr4:203824422 Hean4g04326 Hean-Chr4:203833111 tandem
Hean Hean-Chr4:203833111 Hean4g04327 Hean-Chr4:203842534 tandem