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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean4g04327 ATGCAGCAAAAGATTGTAGTGAAGGTGAGCATGGACGGGGACAAGAAAACCCGTAAAGCTCTGAAGATCGCGGTTAGTATTTCCGGAGTTGAATCCGCGTCTTTCGTTGGGTCAGATAAGGACCAGATAGCAGTGACCGGTGAAGGTATCGACTCCGTTGAACTAACAACCTTACTAAGAAAAAAGGTTGGATACACGGAGCTGGTAAGTGTTGGTCCAGTGGAGGCAAAGAAAGAAGAACCAAAGCCCACTGTGCAAGTTGATCCTTATGAGTATTACTATCATAGCTATGGTGTGCCCTATTATTATGTATCTCCGTATTGA 324 44.75 MQQKIVVKVSMDGDKKTRKALKIAVSISGVESASFVGSDKDQIAVTGEGIDSVELTTLLRKKVGYTELVSVGPVEAKKEEPKPTVQVDPYEYYYHSYGVPYYYVSPY 107
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean4g04327 107 PANTHER OS04G0464100 PROTEIN 3 84 IPR044296 -
Hean4g04327 107 Gene3D - 1 76 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean4g04327 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402145 Hean11g00695 Hean4g04327
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:131244398 Hean4g04327 Hean-Chr4:203842534 dispersed
Hean Hean-Chr1:131274619 Hean4g04327 Hean-Chr4:203842534 dispersed
Hean Hean-Chr4:203824422 Hean4g04327 Hean-Chr4:203842534 dispersed
Hean Hean-Chr4:203842534 Hean3g03151 Hean-Chr3:152360083 dispersed
Hean Hean-Chr4:203833111 Hean4g04327 Hean-Chr4:203842534 tandem
Hean Hean-Chr4:203842534 Hean4g04328 Hean-Chr4:203856263 tandem