AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean4g04338 ATGGCGGTTTCCATCACCGACTACAACCTGGAGTACCGGTGCTCGACAGACGACGCGTGGTACACCTGCGCCGTCGTTCTCGACGACGTCAACCGCAACCTCCGTGTCAAGTTCCGCGATTTTGTTCAAAGTTTCTACGACGAAGTTTTCTCCGTCGCTAACTTCTCGACTCACAGTGAAATCGAACAGTTTCTCCTTAGATTCCGTCCGGTTTCAAAGCCTGTTGAGGATTATGAGTGTTCTGGAATCATTCAAGGCATGCTTGTTTGTGCCATTTACAGAAACAAGGATGAAGCTCTGTATTTTGACGCTGTTGTTGACGCTGTGCGTTATAAAGCGCATAAACCGGAGGAGTGTTTATGCAGTTATCTGCTATGCTGGCAGCATGGACCGGGCAATGGAAATGTAACAAAGTCAACTATCGAGGACATTTGTCTTATTACCGATGGTGCTATTCATCCCAAACTTATTGAGTTCGCAAACCTTATGAAACAACAACTTAAAGGGGCTTCCGTTCAGTCTCAGGTGTTTGGCAGTGCGGGGCATAGTTCTCATGTCGGATCCTCTGCAGAGTTGAGTGATCATGATATCGATATGGGCGGTGTGAAAACAACTGGTCGTCATCATTATATTATGTTGGAAAATCTCGAGAAAGATCTGTGTCCGTTGTTAATGATGGATTTTATACATGAACATACATCAATCACAGCCGAATCGTATGTTTTCCCAAGTTTGTTAGCTGAAACGTATGCACGAGGAGCAATTATGGTAGATAGCACTACAAAGTTGAAGAGGATTTATGATTTTATAAACAATCCAAATCACATCATTACATCTTTCTCTGGAAGGCCGTGGGTTCTTGCTGAAGATGATCTTAGAACCGGAACATTCAACGCAAACCTGCATAGCTTGCAGCCTAAGTATGAGAACTATGGTACAAAGAATGAGTTGAAAGTTGTTCGGTTAGGAACAGAAGAGTACAGAGAATGTAAACAGCAAAAAGATTTATTTTTGGAATTTCGCGGTCATGTAAATGGGCTCGTGAAGAGGTTGGGCATGGAGGAGAAGAAGAATCGGGACCTGTTCAGCTTCTGCAAATTGTGA 1104 43.57 MAVSITDYNLEYRCSTDDAWYTCAVVLDDVNRNLRVKFRDFVQSFYDEVFSVANFSTHSEIEQFLLRFRPVSKPVEDYECSGIIQGMLVCAIYRNKDEALYFDAVVDAVRYKAHKPEECLCSYLLCWQHGPGNGNVTKSTIEDICLITDGAIHPKLIEFANLMKQQLKGASVQSQVFGSAGHSSHVGSSAELSDHDIDMGGVKTTGRHHYIMLENLEKDLCPLLMMDFIHEHTSITAESYVFPSLLAETYARGAIMVDSTTKLKRIYDFINNPNHIITSFSGRPWVLAEDDLRTGTFNANLHSLQPKYENYGTKNELKVVRLGTEEYRECKQQKDLFLEFRGHVNGLVKRLGMEEKKNRDLFSFCKL 367
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean4g04338 367 Gene3D - 75 146 - -
Hean4g04338 367 PANTHER SAWADEE PROTEIN 6 357 - -
Hean4g04338 367 Pfam SAWADEE domain 7 145 IPR032001 GO:0003682(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean4g04338 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr16:150841409 Hean4g04338 Hean-Chr4:204063374 dispersed
Hean Hean-Chr4:204053515 Hean4g04338 Hean-Chr4:204063374 tandem