AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean4g04339 ATGGCGGCAATACTGGCTTCTCACAGCTGCTATTGCCGTGATGTACAATTGGTAAATCAAGTGAGAACAGCAGACAATCTCAGCTTCTCAAGATCCGTTTCTATCCAGAAGTTAGATAAGCATGAATGTACTTTTCCTAAAACCGAGAGGTTCCAGAGGTTACATGCCGAGATGCAGCAGACAGAACCGGTGAAATTTGGTACCAACGGTCGACCTTCAAAGCTTGATACAAATGGTCAATCTGTGAAGTTGGGTGCCAATGGAAAACCGGTGAATTTGGGTACCAACGGTCAACCCGTGAAGTTGGGAAGGCAAGGTAAACCGATCACCATGGTTCCCACCAGTGAGGTAGTGAACAGCAAGCCTGTATCCAAACAAAGAGCTGGAATGATGAATGGATCAGCACAAAGTGTTAACGGAACCGGTCTTGTTAAGAGAGAAATCACACCACCAGTAGTCAAATCGGTCAAAGTTAAAGAACTCAAAGGATTACCACCTTCTGAAGACTTACGGGTCTTGCCATCCGATGAAGGTTTTAGCTGGGCAAATGAAAATTACAATTCAGTTCAAAGGTCAATAGATGTGTGGTCTTTCGTTCTTTCTTTGCGTGTTCGTGTTCTGTTTGACAATGCAAAGTGGGCATATCCCGGTGGCTTCACCGAAGAAAAACAGAAAAACAGAAGAAGGAAAACGGCTTCATGGTTAAGAGAATGTGTGCTTCAACTTGGCCCGACTTTTATCAAACTTGGGCAGTTATCTTCAACGAGATCAGATTTATTCCCACGCGAATTTGTTGACGAACTCGCCAAATTACAGGACAGAGTACCAGCCTTTTCACCAGAAAAAGCAAAAGGTTTTATTGAAAAAGAATTGGGTGCACCAGTTAATGTACTCTACAGGGAGTTTGAAGAACGACCAATTGCAGCTGCTAGTCTCGGTCAGGTGCATCGTGCAATACTACATAATGGCGAGACAGTAGTTGTTAAAGTTCAAAGACCTGGTTTGAAGAAACTTTTCGACATTGATTTACGAAATTTAAAGCTAGTTGCAGAGTATTTTCAAAGAAGTGAAAGTCTTGGTGGGCCCACAAGGGACTGGATCGGTATATACGATGAATGTGCAAAGATCTTGTACCAGGAGATTGATTATATAAATGAAGGAAAAAATGCGGATAGATTTCGCCGAGATTTTCGTAATGTTAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTATACCGCAATGAAGGTGCTGACACTGGAGTACGTTCCAGGCGTTAAGATAAATAATGTAGATGCGATAAAAGAAAGGAGTTACAGTCGATCACGAATCTCTTCACGCGCCATTGAATCATACTTGATTCAGATACTGAAAACCGGTTTCTTCCATGCTGATCCTCATCCTGGAAATCTTGCTATTGATGTGGATGAATCACTAATCTACTATGATTTTGGTATGATGGGGGAGATTAAATCATTCACAAGAGAAAGATTGATGGATCTCTTCTATGCAGTTTATGAAAATGATGCAAAAAAGGTTATGAACAGTTTGATAAGCCTTGAAGCGCTTCAACCTACTGGAGACTTGTCACCAGTAAGGAGATCTATTCAGTACTTTTTGGATAATTTGCTAAACCAGTCACCGGATCAGGAGCAAACTTTGGCTGCAATAGGAGAGGATTTATTCTCTATAGCAACCGATCAGCCTTTCCGGTTCCCGTCCACCTTCACATTTGTAATTAGGGCGTTTTCGACTCTTGAAGGAATTGGCTACTCACTGGATCCAGATTTTTCATTTGTCAAAATTGCTGCACCTTATGCACAGGAGCTGTTAGATCTTAAACAACAACGACCCAGCGGAACACAACTTGTTGCTGAAATACGAAAACAAGCAGATGATGCAAGATCAACCACCATTTCAATGCCTTACCGAGTTCAAAAAATTGAAGAGTTTGTTAAACAGCTAGAAGTAGGAGACATTAAACTTCGTGTCCGGGTTCTCGAGTCTGAGAGAGCAGCTCGGAAGGCAACAATATTGCAAATGGCAACCATGTACACAGTTGTAGGGGGCACTCTCGTAAATATTGGTGTCACGTTTAGCTCACAAGGCAGTCAGCTTATAGCGAATGGGTCATTTGTTGGTGCAGGTATATTCATAGCACTGCTGGTTAGGTCCATGCAAAGGGTGAAGAAGCTTGATAAATTTGAAAAGATGATATGA 2220 42.07 MAAILASHSCYCRDVQLVNQVRTADNLSFSRSVSIQKLDKHECTFPKTERFQRLHAEMQQTEPVKFGTNGRPSKLDTNGQSVKLGANGKPVNLGTNGQPVKLGRQGKPITMVPTSEVVNSKPVSKQRAGMMNGSAQSVNGTGLVKREITPPVVKSVKVKELKGLPPSEDLRVLPSDEGFSWANENYNSVQRSIDVWSFVLSLRVRVLFDNAKWAYPGGFTEEKQKNRRRKTASWLRECVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPEKAKGFIEKELGAPVNVLYREFEERPIAAASLGQVHRAILHNGETVVVKVQRPGLKKLFDIDLRNLKLVAEYFQRSESLGGPTRDWIGIYDECAKILYQEIDYINEGKNADRFRRDFRNVKWVRVPQVFWDYTAMKVLTLEYVPGVKINNVDAIKERSYSRSRISSRAIESYLIQILKTGFFHADPHPGNLAIDVDESLIYYDFGMMGEIKSFTRERLMDLFYAVYENDAKKVMNSLISLEALQPTGDLSPVRRSIQYFLDNLLNQSPDQEQTLAAIGEDLFSIATDQPFRFPSTFTFVIRAFSTLEGIGYSLDPDFSFVKIAAPYAQELLDLKQQRPSGTQLVAEIRKQADDARSTTISMPYRVQKIEEFVKQLEVGDIKLRVRVLESERAARKATILQMATMYTVVGGTLVNIGVTFSSQGSQLIANGSFVGAGIFIALLVRSMQRVKKLDKFEKMI 739
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean4g04339 739 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 48 668 IPR050154 GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER)
Hean4g04339 739 CDD ABC1-ADCK3-like 270 517 - -
Hean4g04339 739 Pfam ABC1 atypical kinase-like domain 270 516 IPR004147 -
Hean4g04339 739 SUPERFAMILY Protein kinase-like (PK-like) 272 606 IPR011009 -
Hean4g04339 739 MobiDBLite consensus disorder prediction 112 138 - -
Hean4g04339 739 MobiDBLite consensus disorder prediction 81 138 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean4g04339 K03688 ubiquinone biosynthesis protein
Hean4g04339 K08869 aarF domain-containing kinase
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Event-related genes

Select Gene_1 Gene_2 Event_name
402142 Hean11g00678 Hean4g04339
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr14:128067160 Hean4g04339 Hean-Chr4:204070381 dispersed
Hean Hean-Chr15:90005997 Hean4g04339 Hean-Chr4:204070381 dispersed
Hean Hean-Chr2:16748432 Hean4g04339 Hean-Chr4:204070381 dispersed
Hean Hean-Chr4:204070381 Hean8g00924 Hean-Chr8:20360823 dispersed
Hean Hean-Chr10:4419302 Hean4g04339 Hean-Chr4:204070381 transposed
Hean Hean-Chr14:79355384 Hean4g04339 Hean-Chr4:204070381 transposed
Hean Hean-Chr3:151784871 Hean4g04339 Hean-Chr4:204070381 transposed
Hean Hean-Chr9:94422659 Hean4g04339 Hean-Chr4:204070381 transposed
Hean Hean-Chr17:9057377 Hean4g04339 Hean-Chr4:204070381 transposed
Hean Hean-Chr11:13788558 Hean4g04339 Hean-Chr4:204070381 wgd