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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean4g04343 ATGCATCCACCGGCGGCGATCTCTCTCCTCTTCCTCCTCCTCTTAACCATCACCACCACCACCAATGGTCACAACATCACCCGTATCCTCCAAAAGAACCCAGAATTCTCAACCTTCAACCACTATCTAACCCTAACCCACCTCGCCGGAGAGATCAACCGTCGGCAAACCATCACTGTCTGTGCCGTCGACAATGCCGCCATGTCCGACTTAACCGCGAAAGGCCTCTCACTCGAAACCATCAAAAATGTCCTCTCACTTCACGTCTTTGCAGACTATTATGGCGCCAAAAAGCTCCACGAGATCACCAAAGGCTCCACCTCCACCGCCACCATGTACCAAGCCACCGGCGAAGCCCCTGGCACCACCGGATTCGTTCACATCACCGACGCTAAAGGTGGTAAAGTTCGGTTCACCCCTGAAGATAATCCCTCTCAAACCGACGTCGTTTTTGTGAAATCGGTTCTTGAAATGCCCTACAACATTTCTGTCATCCAGATCAGCCAGGTAATTCAAATTGGTATAGAAAAAAGATCAAATACAAATATGTTTATCGTATAA 561 49.2 MHPPAAISLLFLLLLTITTTTNGHNITRILQKNPEFSTFNHYLTLTHLAGEINRRQTITVCAVDNAAMSDLTAKGLSLETIKNVLSLHVFADYYGAKKLHEITKGSTSTATMYQATGEAPGTTGFVHITDAKGGKVRFTPEDNPSQTDVVFVKSVLEMPYNISVIQISQVIQIGIEKRSNTNMFIV 186
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean4g04343 186 SUPERFAMILY FAS1 domain 29 171 IPR036378 -
Hean4g04343 186 ProSiteProfiles FAS1-BIgH3 domain profile. 23 171 IPR000782 -
Hean4g04343 186 FunFam Fasciclin-like arabinogalactan protein 2 22 164 - -
Hean4g04343 186 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 172 IPR033254 GO:0046658(PANTHER)
Hean4g04343 186 Gene3D FAS1 domain 22 172 IPR036378 -
Hean4g04343 186 Pfam Fasciclin domain 34 117 IPR000782 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean4g04343 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
103542 Hean3g02190 Hean4g04343
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr4:204166599 Hean5g03452 Hean-Chr5:171832185 dispersed
Hean Hean-Chr4:204083358 Hean4g04343 Hean-Chr4:204166599 proximal