AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean4g04380 ATGAGGAAGCTCTACAACCACAACAAAGGCAAAATCCACCCATCACCACCACCACCACCACCATCCAACACCACCACCACCATCGACCACCTATCTCTGCTACCGTTGGCCGTAGCCACACTCGCAGCCGCACTCGCACCCGAAGACCAAGAAGTTTTGGCATACCTTCTCTCATGTACCACCACCAAGATTGACAATAATACCAAAACCGGAACCCATGCACCTAAATTCAATTGCTACTGTTTTTCATGCTACACGAGTTACTGGGCTCGTTGGGACGCTTCACCTAGACGTGACCTCATACACGAAGTAATTGATACGTATGAAGCTAAATACGCGATAACAAATAATAATAATAAGAGGAATGGGAAGAACAAAAACAAGAAAAAGAACAATAAGGTGACACCCTCTTCTTGTTCTCCACACGTGCCAGAGACAGCCTCGCACGTGCCGCAACTAGTTGAGGAAACTAGAATCAATAATAGTGATTGTGTTGAAGATGAAGATGGATTGATTGTTGGGACATCATCAGGAGAGAAAGAGAAAGGGTCAATAAAAAAAATGGTAAGTTTTATTGGGGAGAGAATATGGGGTGTTTGGGGGATTTGA 609 44.5 MRKLYNHNKGKIHPSPPPPPPSNTTTTIDHLSLLPLAVATLAAALAPEDQEVLAYLLSCTTTKIDNNTKTGTHAPKFNCYCFSCYTSYWARWDASPRRDLIHEVIDTYEAKYAITNNNNKRNGKNKNKKKNNKVTPSSCSPHVPETASHVPQLVEETRINNSDCVEDEDGLIVGTSSGEKEKGSIKKMVSFIGERIWGVWGI 202
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean4g04380 202 PANTHER F12F1.11-RELATED 1 201 - -
Hean4g04380 202 MobiDBLite consensus disorder prediction 116 147 - -
Hean4g04380 202 MobiDBLite consensus disorder prediction 1 24 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean4g04380 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
100857 Hean10g02775 Hean4g04380
101570 Hean12g02229 Hean4g04380
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr10:148298234 Hean4g04380 Hean-Chr4:204712900 dispersed
Hean Hean-Chr15:12861398 Hean4g04380 Hean-Chr4:204712900 dispersed
Hean Hean-Chr4:204712900 Hean12g02229 Hean-Chr12:67341138 transposed