Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean4g04391 | ATGATTAAGCAAATATTGAATAAGCTTCCTAGGAAATCATCTTCTAAATCAGTTCATAATGATGAAAGAAGCAATGAATTGGATTCTGCTGTTGTGAATTCAACTGGTGTGAGTGATAAAGTTTCAAAATTGAGTTTGACTGTTAAGTCAAAGTCAAAGTCAAATGTTGACTCAGTTCCTGCTTCTTATGAAGCATTACCGAGTTTTCGAATAGTGTCGAGTTCCGAAAAACACAACTTGTTCATCAAGAAGTTGAACATGTGTTGTGTGGTGTTCGATTTTAACGAACCCGAAAAGAATGTTAAAGAGAAAGACGTGAAGAAACAGACGTTGCTCGAGCTCGTTGATTACGTGTCGTCGGTTAATTCGAAGTTCAACGAGGTTACGATACAGGAGATAACGAAAATGGTGGCTGCGAATCTGTTCCGGGCTCTACCGAATTTGAACCACGAAAACAAAGCCGTGGATTTGTACGATCAAGAAGACGACGAGTTTTTTATGGACCCGTCGTGGCCGCATCTTCAAATCGTGTACGAGTTTCTTCTTCGGTTTGTGGCGTCACCCGAAACGAATGCGAAGCTTGCTAAACGGTACGTCGATCATTCGTTCGTGTTGAGGTTGCTTGATCTGTTTGATTCGGAAGATCAACGAGAACGCGAGTATTTGAAAACAATCTTGCATAGAATTTACGGGAAGTTCATGGTTCATCGACCGTTTATCCGGAAAGCGGTTAACAATATCTTTTATCATTTCATGTTCGAAAGTGAGAAACATAACGGGATTGCGCAATTACTTGAGGTGTTAGGGAGTATCGTTAACGGGTTTGCTTTGCCGTTGAAGGATGAACATAAGCTTTTTCTTGCTCACGTGTTGATCCCGCTTCATAAGCCGAAATGTTTGTCGATGTATCACCAGCAGCTCGTGTATTGTGTTTGTCAGTTTGTCGAAAAAGATGCGAAATTGGCGGATACTGTTGTTCGGGGGTTGCTCAAGTATTGGCCGGTAACTAGTAGTTCGAAAGAGGTCATGTTTCTTGGTGAATTGGAGGAAATTCTTGAAGTTACACAAGCTGCGGAGTTCGAAAAGTTTATGGCCCCTTTGTTCGGTCGAATCGGTCAATGCATCAACAGTTCACATTTTCAGGTGGCAGAACGCGCGTTGTTCTTGTGGAATAACGAACACATAAGGAATCTAACGACTCAAAACCGCAAAGTGATTCTTCCCATCATCTTCTCTCCCTTGGAGAAAAACACGCACGGTCATTGGAACCAAGCTGTTCAAAGCCTAACCTTAAACGTCAGAAAAATATTCTCAGACGCCGATCAGTCAACGTTCCAAGATTGTCTGGTCAAATACCAAGAAGACGAAACCAAAGAGAAAGAAAACATCGCAAAACGACAGTCAACATGGAACCGCCTAGATGCTATGGCAGTCGCCAAAACCAAGCCTATGGTCGTCTCAACGTCTGCCACTATCACCACCACCGTTGCCACCAGCACCACCGCCGAAACCGCCTCCACCGTTAAGCAAAGTACTGGTGGCAGGTAA | 1548 | 43.22 | MIKQILNKLPRKSSSKSVHNDERSNELDSAVVNSTGVSDKVSKLSLTVKSKSKSNVDSVPASYEALPSFRIVSSSEKHNLFIKKLNMCCVVFDFNEPEKNVKEKDVKKQTLLELVDYVSSVNSKFNEVTIQEITKMVAANLFRALPNLNHENKAVDLYDQEDDEFFMDPSWPHLQIVYEFLLRFVASPETNAKLAKRYVDHSFVLRLLDLFDSEDQREREYLKTILHRIYGKFMVHRPFIRKAVNNIFYHFMFESEKHNGIAQLLEVLGSIVNGFALPLKDEHKLFLAHVLIPLHKPKCLSMYHQQLVYCVCQFVEKDAKLADTVVRGLLKYWPVTSSSKEVMFLGELEEILEVTQAAEFEKFMAPLFGRIGQCINSSHFQVAERALFLWNNEHIRNLTTQNRKVILPIIFSPLEKNTHGHWNQAVQSLTLNVRKIFSDADQSTFQDCLVKYQEDETKEKENIAKRQSTWNRLDAMAVAKTKPMVVSTSATITTTVATSTTAETASTVKQSTGGR | 515 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean4g04391 | 515 | FunFam | Serine-threonine protein phosphatase 2A regulatory subunit | 73 | 476 | - | - | |
| Hean4g04391 | 515 | SUPERFAMILY | ARM repeat | 78 | 460 | IPR016024 | - | |
| Hean4g04391 | 515 | PANTHER | SERINE-THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B | 1 | 481 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Hean4g04391 | 515 | Pfam | Protein phosphatase 2A regulatory B subunit (B56 family) | 66 | 477 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Hean4g04391 | 515 | Gene3D | - | 74 | 475 | IPR011989 | - | |
| Hean4g04391 | 515 | PIRSF | PP2A-B56 | 3 | 513 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Hean4g04391 | 515 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean4g04391 | K11584 | serine/threonine-protein phosphatase 2A regulatory subunit B' |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr3:115869824 | Hean4g04391 | Hean-Chr4:204891114 | dispersed | |
| Hean | Hean-Chr4:204891114 | Hean8g00148 | Hean-Chr8:1851206 | dispersed | |
| Hean | Hean-Chr4:204891114 | Hean7g02379 | Hean-Chr7:132132777 | transposed |