Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean4g04393 | ATGGATTTTGAGTTGAGAAGAGCGAGAGAGAAATTGGAGAAAGAACAAAAGGATCGAAAAGAAAAGGCCAAATTACGATTGGAAAGAGAGAGAAAAGCCAAATTAGAAGCTAATCGCCACCGTGAAGCCATTGAATCTGCTCAGAGATCTCGTAGAATCCATGCAATGGAAGCACAAATTAAGGCAGAGCAACAAATGGAAGAAACTATATTTGCCGGTAGAGGAATTTCATTCAACCGCGTTCTTGAAGCGGTACCGTTTGAGGGTTCCGGAGATAAAATCAAACTACCACCTTCGTGTTTCAATGAACTATCAGAGCAAGGTGCTTTTGACAAAGGCCCCCTTCATTTCCAGTTATCAGTAGCTCACCAAGATCACGAGTCAACTCACGGGTCAACTCATGCTGGGGTCTTGGAATTCACTGCAGACGAAGGTACAGTCGGGATCCCGCCTCATATTTGGAATAACTTATACTCCAAACAAGATCCAAACACTCCTTTAGTTGAAGTTAAATATGTTTGGTTATCGAAGGGAACGTATGCGAAACTTCAATCGGAAGAACTCGGGTTCTCGGACATACCCAATCACAAAGCGGTTCTTGAAACGACTCTTCGCCAACACGCAACTCTTTCTCAAGATGATGTTTTGACGGTCAAACACGGTGTGTTAACTTTCCATCTACGCGTTCTTGAACTAAAACCGTCGTCAAGTGTGTCTGTTCTCGAAACCGATATCGAGGTTGATATTATGGGTCCTGATTCACTTCCCGAAAAAACCACCCAACACGTGTTGAAACCACTAACGTTTGGGAAATCAGAATCGGGAATTATAAACGAAGGAGAATACGCGTATTACAAGTTTTCAATAGACGATGACACATGGAAAATAATCGCTCTTGGAGATGTTGAAATTGAAGTGAATTTGGATTCGGAGTCGAATGGAGATACCGATCTTTATCTTTCCCGACACCCGTTATTGTTTCCAAACACGCACCAACACGGTTGGTCTAGCCACGATTTGGGGTCAAAGTGTTTGGTTCTCGGGTCAAAGGACCACACCTTGGGTCCGGGTAGCTATAGTGTCGGTGTATACGGGTTCAAAGGAACAACAAAATATAACGTTTCAGTAACCGTTAAAGACACGTCGAAGTCAAACGTTGGTCAACAACCCATGTCGTCTTCTTCAGATGGGTTAACATCAACAGCGGATACGGTAGAGTGCGGGAACTGCAAACATTATATACCCGTGAGAACCATAGCGCTTCACGAGGCGTATTGTAGAAGACATAACGTGATTTGTCAGCATACGGGTTGCGGTGTCGTGTTGAGAACCGAAGAGGTTAAGAATCACGTGCATTGCGTGAAATGTGAACAGGCTTTTCATAGTACCGAGATGGAAAAACACATGAAGGTGTTTCATGAGCCGTTATCCTGCGCGTGTGGGGTCGTTCTTGAGAAGACACAGATGGTGCAACACCAGTCGTCAGAGTGTGCCTTACGGCTAGTGACATGTCGGTTTTGTGGAGACATGGTCCAAGCTGGTTCACTAGCGGTTGATGCACGAGACCGGTTAAGAGGACTCTCGGAACATGAGAGTCTTTGTGGGTCCAGAACGGCGCCGTGTGACTCGTGTGGTCGTGCGGTTATGTTGAAAGAAATGGATATTCATCAAGTAGCTGTTCATCAGAAGAATTGA | 1695 | 44.84 | MDFELRRAREKLEKEQKDRKEKAKLRLERERKAKLEANRHREAIESAQRSRRIHAMEAQIKAEQQMEETIFAGRGISFNRVLEAVPFEGSGDKIKLPPSCFNELSEQGAFDKGPLHFQLSVAHQDHESTHGSTHAGVLEFTADEGTVGIPPHIWNNLYSKQDPNTPLVEVKYVWLSKGTYAKLQSEELGFSDIPNHKAVLETTLRQHATLSQDDVLTVKHGVLTFHLRVLELKPSSSVSVLETDIEVDIMGPDSLPEKTTQHVLKPLTFGKSESGIINEGEYAYYKFSIDDDTWKIIALGDVEIEVNLDSESNGDTDLYLSRHPLLFPNTHQHGWSSHDLGSKCLVLGSKDHTLGPGSYSVGVYGFKGTTKYNVSVTVKDTSKSNVGQQPMSSSSDGLTSTADTVECGNCKHYIPVRTIALHEAYCRRHNVICQHTGCGVVLRTEEVKNHVHCVKCEQAFHSTEMEKHMKVFHEPLSCACGVVLEKTQMVQHQSSECALRLVTCRFCGDMVQAGSLAVDARDRLRGLSEHESLCGSRTAPCDSCGRAVMLKEMDIHQVAVHQKN | 564 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean4g04393 | 564 | Gene3D | Zinc-RING finger domain, C3HC4 (zinc finger) | 472 | 523 | IPR013083 | - | |
| Hean4g04393 | 564 | Pfam | TRAFD1-XAF1, zinc finger | 527 | 556 | IPR049439 | - | |
| Hean4g04393 | 564 | Gene3D | - | 177 | 250 | - | - | |
| Hean4g04393 | 564 | Gene3D | - | 271 | 384 | - | - | |
| Hean4g04393 | 564 | Pfam | Ubiquitin fusion degradation protein UFD1 | 90 | 252 | IPR004854 | GO:0006511(InterPro) | |
| Hean4g04393 | 564 | Coils | Coil | 5 | 50 | - | - | |
| Hean4g04393 | 564 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Hean4g04393 | 564 | Gene3D | - | 75 | 175 | IPR042299 | - | |
| Hean4g04393 | 564 | PANTHER | UBIQUITIN FUSION DEGRADATON PROTEIN 1 | 1 | 536 | IPR004854 | GO:0006511(InterPro)|GO:0030433(PANTHER)|GO:0031593(PANTHER)|GO:0034098(PANTHER)|GO:0071712(PANTHER) | |
| Hean4g04393 | 564 | SUPERFAMILY | TRAF domain-like | 405 | 469 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean4g04393 | K14016 | ubiquitin fusion degradation protein 1 |