AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean4g04408 | ATGGGTACACTATTCAAATCGAGCTTTCTTTTGTTGTTTCTTTGGTTTATTCTGTCACCGACTGCGTATTCGGGCCCTAATGGTGGATTGGTTAGAGTCGGACTAAAAAAGAGGAAAATCAACCAATTGAACCAAGTTGGTGGACACGCTGGCTCGAATGAAGGAAATGCTAGAAGAAATCACGTTGTTCGTGGTAATTTCGGGGATTCGGAGAGCGACATTATTGCCCTAAACAATTACATGGATGCTCAGTATTATGGTGAGATTGGTATTGGTACTCCGCCTCAGAAGTTCACCGTGATTTTTGACACTGGTAGTTCTAATCTGTGGGTCCCTTCTGCAAAGTGCTACTTCTCAGTCGCTTGCCTCTTTCACTCTAAGTATAAGTCCAGCCACTCAAGTTCCTATGAGAAAAATGGTAAATCGGCTGCAATTCAGTATGGAACTGGCTCTATCTCCGGTTTCTTTAGCAAAGACTCTGTGAAGCTTGGTGACCTTGTTGTAAAAGGACAGGATTTTATAGAGGCAACTAAAGAGCCCGGTATCACTTTCTTGGCAGCCAAGTTTGATGGTATACTTGGCCTTGGGTTTCAAGAAATCTCTGTTGGTGATGCTGTTCCTGTTTGGTACAACATGGTGGAACAAGGTCTTGTTCCCGAACCCGTATTTTCATTCTGGCTTAATCGCAATGCTGACGAGGGTGAAGGGGGTGAACTTGTGTTTGGTGGGGTTGATGCCACTCATTTCAAGGGTGAACACACATATGTCCCCGTGACTCAAAAAGGCTACTGGCAGTTTGATATGGGTGAGGTCCTGATTGGTGATAAAACAACCGGATTTTGCGACAATGGTTGTGCGGCAATTGCTGATTCTGGAACTTCTTTGTTGGCTGGTCCAACGGCTGTTGTTACGCAAATCAATCAAGCCATTGGTGCTGCTGGAGTTATGAGCCAACAGTGCAAGACGTTGGTCGATCAGTACGGAAAATCTATAATTGAGATGCTACTATCTGAGACGCAACCTGAAAAAGTCTGCTCTCAAATGAAGTTATGCACCTTTGACGGTTCTCATGATACTAGCATGATAATCGAGAGTGTAGTTGACAAGAATAACGGAAAATCATCTGGTGTACATGATGAGATGTGTACTCTCTGTGAGATGGCAGTTGTCTGGATGCAAAACCAGATCAAGCGAAATGAGACCGAAGATCAAATAATTAACTATGTTGATCAGCTGTGTGAGCGGATACCAAGTCCAATGGGTGAATCTGGAGTTGACTGCAACAGTCTTTCATCCATGCCTCATATCGCATTTACCATTGGTGGTAAAACTTTTGACCTCTCACCCGAGGAGTATGTCCTGAAAGTTGGTGAAGGAGCAGCAGCACAATGCATTAGTGGATTTACTGCTCTTGATGTGGCTCCTCCTCGTGGGCCCCTATGGATCTTGGGAGATATTTTCATGGGTAAATACCACACGGTGTTTGACTATGGTAAATTACGAGTCGGGTTTGCAGAAGCAGTTTGA | 1527 | 44.27 | MGTLFKSSFLLLFLWFILSPTAYSGPNGGLVRVGLKKRKINQLNQVGGHAGSNEGNARRNHVVRGNFGDSESDIIALNNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSAKCYFSVACLFHSKYKSSHSSSYEKNGKSAAIQYGTGSISGFFSKDSVKLGDLVVKGQDFIEATKEPGITFLAAKFDGILGLGFQEISVGDAVPVWYNMVEQGLVPEPVFSFWLNRNADEGEGGELVFGGVDATHFKGEHTYVPVTQKGYWQFDMGEVLIGDKTTGFCDNGCAAIADSGTSLLAGPTAVVTQINQAIGAAGVMSQQCKTLVDQYGKSIIEMLLSETQPEKVCSQMKLCTFDGSHDTSMIIESVVDKNNGKSSGVHDEMCTLCEMAVVWMQNQIKRNETEDQIINYVDQLCERIPSPMGESGVDCNSLSSMPHIAFTIGGKTFDLSPEEYVLKVGEGAAAQCISGFTALDVAPPRGPLWILGDIFMGKYHTVFDYGKLRVGFAEAV | 508 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean4g04408 | 508 | FunFam | Vacuolar aspartic proteinase | 399 | 507 | - | - | |
| Hean4g04408 | 508 | SUPERFAMILY | Saposin | 316 | 417 | IPR011001 | - | |
| Hean4g04408 | 508 | Gene3D | Acid Proteases | 31 | 243 | IPR021109 | - | |
| Hean4g04408 | 508 | ProSiteProfiles | Peptidase family A1 domain profile. | 85 | 505 | IPR033121 | - | |
| Hean4g04408 | 508 | Gene3D | - | 315 | 417 | - | - | |
| Hean4g04408 | 508 | SMART | sapb-4 | 279 | 351 | IPR008139 | - | |
| Hean4g04408 | 508 | SMART | sapb-4 | 380 | 464 | IPR008139 | - | |
| Hean4g04408 | 508 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 100 | 111 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hean4g04408 | 508 | ProSiteProfiles | Saposin B type domain profile. | 315 | 355 | IPR008139 | - | |
| Hean4g04408 | 508 | Gene3D | Acid Proteases | 244 | 507 | IPR021109 | - | |
| Hean4g04408 | 508 | PRINTS | Pepsin (A1) aspartic protease family signature | 91 | 111 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hean4g04408 | 508 | PRINTS | Pepsin (A1) aspartic protease family signature | 237 | 250 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hean4g04408 | 508 | PRINTS | Pepsin (A1) aspartic protease family signature | 287 | 298 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hean4g04408 | 508 | PRINTS | Pepsin (A1) aspartic protease family signature | 481 | 496 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hean4g04408 | 508 | ProSiteProfiles | Saposin B type domain profile. | 378 | 419 | IPR008139 | - | |
| Hean4g04408 | 508 | FunFam | Lysosomal aspartic protease | 71 | 313 | - | - | |
| Hean4g04408 | 508 | Pfam | Saposin-like type B, region 2 | 318 | 351 | IPR008138 | - | |
| Hean4g04408 | 508 | Pfam | Eukaryotic aspartyl protease | 84 | 507 | IPR033121 | - | |
| Hean4g04408 | 508 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 287 | 298 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hean4g04408 | 508 | PANTHER | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED | 24 | 507 | IPR001461 | GO:0004190(PANTHER)|GO:0004190(InterPro)|GO:0006508(InterPro)|GO:0006508(PANTHER) | |
| Hean4g04408 | 508 | CDD | phytepsin | 75 | 506 | IPR033869 | GO:0004190(InterPro) | |
| Hean4g04408 | 508 | Pfam | Saposin-like type B, region 1 | 381 | 417 | IPR007856 | GO:0006629(InterPro) | |
| Hean4g04408 | 508 | SUPERFAMILY | Acid proteases | 10 | 507 | IPR021109 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean4g04408 | K08245 | phytepsin [EC:3.4.23.40] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 103530 | Hean3g01780 | Hean4g04408 | |
| 404082 | Hean16g00946 | Hean4g04408 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr16:135165025 | Hean4g04408 | Hean-Chr4:205185244 | dispersed | |
| Hean | Hean-Chr17:17948393 | Hean4g04408 | Hean-Chr4:205185244 | dispersed | |
| Hean | Hean-Chr17:125415030 | Hean4g04408 | Hean-Chr4:205185244 | dispersed | |
| Hean | Hean-Chr4:205185244 | Hean6g02436 | Hean-Chr6:77353354 | dispersed | |
| Hean | Hean-Chr9:124942367 | Hean4g04408 | Hean-Chr4:205185244 | dispersed | |
| Hean | Hean-Chr15:102419636 | Hean4g04408 | Hean-Chr4:205185244 | transposed | |
| Hean | Hean-Chr1:32172103 | Hean4g04408 | Hean-Chr4:205185244 | transposed | |
| Hean | Hean-Chr1:32176252 | Hean4g04408 | Hean-Chr4:205185244 | transposed | |
| Hean | Hean-Chr3:104601397 | Hean4g04408 | Hean-Chr4:205185244 | transposed | |
| Hean | Hean-Chr4:96575083 | Hean4g04408 | Hean-Chr4:205185244 | transposed | |
| Hean | Hean-Chr16:29773786 | Hean4g04408 | Hean-Chr4:205185244 | wgd |