AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean4g04412 ATGAAGATGGCATTGTTGATATTTGTGTTAATATTAATGGTAAACAGCATTAGTGGTGAAGACCCTTATAGATTCTTCAACTGGAATGTTACTTATGGTGACATCTACCCACTTGGAGTTAAACAACAGGGGATATTGATCAATGGCCAGTTTCCAGGGCCACAAATTGATGCAGTGACTAATGATAATGTGATTGTTAGCGTTTACAATAGCTTGGATGAACCATTCCTTATTACCTGGAATGGGATACAACAAAGGAGGAATTCATGGCAAGATGGTGTTTATGGCACCAATTGCCCCATCCCACCTGGTCAAAACTTCACCTACATTCTTCAATTCAAGGATCAAATAGGAAGTTTTTTCTACTTCCCCTCACTCGCATTTCACCGGGCGGCTGGAGGTTATGGTGGTATTTCCATCTCCAGCCGTCCGATGATCCCCGTCCCCTTTCCTCCACCCGCCGGAGACTTCACCATTCTGGCGGGTGATTGGTTCAAGCAAAACCACACTGATTTGAAAGCGATACTAGATGGTGGCCATGATCTTCCGTTCCCCGATGGTCTTCTCATCAATGGCCGAGGATCTAACGGATTTACATTTAACGTTGATCAAGGGAAAACATATAGATTGAGGATTTCAAACGTGGGGCTTACAACATCAATAAATTTCAGAATCCAGGGCCACAAAATGCTGCTTGTGGAGGTAGAAGGGACTCATACTCTTCAGAACACATACTCTTCACTTGATATTCATCTGGGCCAGACATACTCTGTGTTGGTCACCGCGGATCAACCGCCACAGAACTATTACATGGTCGTCTCCACTCGGTTTACCTCCCAAGTCCTCACCGCGACTTCCATTCTTCGTTACACCAACTCGCCCGGATCTTTTCCCGCTCCTCCACCTGGCGGTCCGACCATCCAAATCGACTGGTCTTTGAATCAAGCCCGCTCAATCAGGCAAAACTTGACCGCAAGTGGTCCGAGGCCGAACCCGCAAGGTTCATACCATTACGGGATGGTTAACTTCACTCGAACGATCAGGCTCGCCAACTCTGCTCCGGTTATAAACGGAAAACAGCGCTACGCGGTCAACAGCGTGTCATTTATCCCCGCGGACACCCCTCTAAAGATCGCTGATTATTTCAAGATCTCGGGTGTGTTTTCGCTTGGAACTATCTCCGACAGCCCGACAGGTGGCGGTGGGTACCTCCAGACTTCGGTCATGGCCGCGGATTTCAGAGCATTTGTCGAGATCGTGTTCGAGAATTCAGAAGATACCGTGCAGTCATGGCACATTGACGGTCACTTCTTCTTTGTCGTCGGGATGGATGGCGGGCCGTGGTCCGCTGCTAGCCGAGCAAGTTACAATTTAAGAGACGGGGTTTCGCGATCCACTGTCCAGGTGTATCCGAAATCATGGACCGCGTTGTATGTACCATTAGACAATGTCGGGATGTGGAATATACGATCCCAGAATTGGGCGCGACAATACTTAGGTCAACAGTTTTATCTTCGGGTGTATTCACCGGTGAATTCATGGAGAGATGAGTACCCGATTCCGAAGAATGCCATTACTTGCGGCCGAGCAAGTGGCCGCAAGACCAGGCCCCTGTAA 1617 48.36 MKMALLIFVLILMVNSISGEDPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNVIVSVYNSLDEPFLITWNGIQQRRNSWQDGVYGTNCPIPPGQNFTYILQFKDQIGSFFYFPSLAFHRAAGGYGGISISSRPMIPVPFPPPAGDFTILAGDWFKQNHTDLKAILDGGHDLPFPDGLLINGRGSNGFTFNVDQGKTYRLRISNVGLTTSINFRIQGHKMLLVEVEGTHTLQNTYSSLDIHLGQTYSVLVTADQPPQNYYMVVSTRFTSQVLTATSILRYTNSPGSFPAPPPGGPTIQIDWSLNQARSIRQNLTASGPRPNPQGSYHYGMVNFTRTIRLANSAPVINGKQRYAVNSVSFIPADTPLKIADYFKISGVFSLGTISDSPTGGGGYLQTSVMAADFRAFVEIVFENSEDTVQSWHIDGHFFFVVGMDGGPWSAASRASYNLRDGVSRSTVQVYPKSWTALYVPLDNVGMWNIRSQNWARQYLGQQFYLRVYSPVNSWRDEYPIPKNAITCGRASGRKTRPL 538
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean4g04412 538 SUPERFAMILY Cupredoxins 340 529 IPR008972 -
Hean4g04412 538 CDD CuRO-1-AAO-like-1 25 140 IPR034273 GO:0005507(InterPro)
Hean4g04412 538 Gene3D - 23 144 IPR008972 -
Hean4g04412 538 PANTHER MULTI-COPPER OXIDASE 24 504 IPR045087 GO:0016491(PANTHER)
Hean4g04412 538 SUPERFAMILY Cupredoxins 150 330 IPR008972 -
Hean4g04412 538 Gene3D - 154 329 IPR008972 -
Hean4g04412 538 Pfam Multicopper oxidase 29 143 IPR011707 GO:0005507(InterPro)
Hean4g04412 538 FunFam Monocopper oxidase-like protein 340 537 - -
Hean4g04412 538 FunFam Monocopper oxidase-like protein 154 328 - -
Hean4g04412 538 Pfam Multicopper oxidase 156 292 IPR001117 -
Hean4g04412 538 SUPERFAMILY Cupredoxins 19 170 IPR008972 -
Hean4g04412 538 Gene3D - 339 535 IPR008972 -
Hean4g04412 538 Pfam Multicopper oxidase 373 510 IPR011706 GO:0005507(InterPro)|GO:0016491(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean4g04412 K19791 iron transport multicopper oxidase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr15:14437147 Hean4g04412 Hean-Chr4:205221591 dispersed
Hean Hean-Chr3:104941792 Hean4g04412 Hean-Chr4:205221591 dispersed
Hean Hean-Chr4:205221591 Hean5g01753 Hean-Chr5:104737012 dispersed
Hean Hean-Chr4:205221591 Hean5g00047 Hean-Chr5:1306821 transposed