Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean4g04469 | ATGAATCAAATTAGCAGAAAAAAATGGGGATTAAACCTGAAGAGAACAATCATATGGCGGGTGGCGTTTCTTCGGCGATGTGTTCGATCTCTGTGGCACCAAATTCTGACGTGTTGGATGGGGAAATCTGTCCGGTACCGGCAATTGTTGAATTCTGGTTCCGGGCAATTGATACCGACGTCTAGTCGGTATCTTTTGCCGGCGGAGAGGGCAACCGCGGTCGATATGGCTGCTGTGTCAGCCTCTAGTAGTGATCGGTTTGCTTCCGGTGAAATGACGTCATCTTTTGGTGGTGATGGTTGTGATCATGATGCTTCTGATTTGGTAGCTTTGAAGATTTGTTTGTTGGGTGATCAACAAATCGGCAAAACCAGCTTTTTGGCAAAATATGTGGGGAAAGAAAAAAATCAAGAAGAATCATCAACTAAAAAAATAGATCATATGGATAAAACCCTATGTGTCAAAGGAGCCAGAATCTCATATAACATATGGGAAGTTAGTGGTGATGCATTATATCCAGATGGTGATTCAAGGACTCTGATTCCTACAGCTTGTAAGGACTCTGTAGCGATCTTGTTCATGTTTGATCTAACAAGTCGTCGGACGCTTAACAGTGTTATCAATTGGCATCAACAAGCTAGGAATTATAATCAGACCGCGATTCCAGTAATGGTCGGGAGCAAATTTGATGAGTTTGTCCAGCTTCCGTTAGATTTACAATGGACGATCACAAGTGAGGCAAGAGCGTACGCGAAAGCTATAAACGCGCCCTTATTCTTCTCGAGTGCGTCTTACAACATAAATGTAAATAAAATCTTCAAGTTTGTTACTGCAAAGCTCTTTGATTTGTCATGGACCCTGGAACGTAATCTTACAGTTGGTGAACCTATTATTGATTTCTAG | 903 | 42.08 | MNQISRKKWGLNLKRTIIWRVAFLRRCVRSLWHQILTCWMGKSVRYRQLLNSGSGQLIPTSSRYLLPAERATAVDMAAVSASSSDRFASGEMTSSFGGDGCDHDASDLVALKICLLGDQQIGKTSFLAKYVGKEKNQEESSTKKIDHMDKTLCVKGARISYNIWEVSGDALYPDGDSRTLIPTACKDSVAILFMFDLTSRRTLNSVINWHQQARNYNQTAIPVMVGSKFDEFVQLPLDLQWTITSEARAYAKAINAPLFFSSASYNINVNKIFKFVTAKLFDLSWTLERNLTVGEPIIDF | 300 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean4g04469 | 300 | ProSiteProfiles | small GTPase Rab1 family profile. | 104 | 300 | - | - | |
| Hean4g04469 | 300 | PANTHER | - | 109 | 299 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) | |
| Hean4g04469 | 300 | FunFam | Septum-promoting GTP-binding protein 1 | 101 | 290 | - | - | |
| Hean4g04469 | 300 | Pfam | Ras family | 112 | 279 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Hean4g04469 | 300 | Gene3D | - | 102 | 290 | IPR027417 | - | |
| Hean4g04469 | 300 | PRINTS | Transforming protein P21 ras signature | 152 | 174 | - | - | |
| Hean4g04469 | 300 | PRINTS | Transforming protein P21 ras signature | 111 | 132 | - | - | |
| Hean4g04469 | 300 | PRINTS | Transforming protein P21 ras signature | 218 | 231 | - | - | |
| Hean4g04469 | 300 | PRINTS | Transforming protein P21 ras signature | 258 | 280 | - | - | |
| Hean4g04469 | 300 | SMART | rab-sub-5 | 111 | 283 | - | - | |
| Hean4g04469 | 300 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 111 | 291 | IPR027417 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean4g04469 | K07976 | Rab family, other |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 404063 | Hean16g00806 | Hean4g04469 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr4:206103656 | Hean8g02941 | Hean-Chr8:108200484 | dispersed | |
| Hean | Hean-Chr16:22836515 | Hean4g04469 | Hean-Chr4:206103656 | wgd |