AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean4g04502 ATGACACGTGTCACACGCACGATTACATGTAAGAAACCACCTGCAAACGCACAAAATCGGTTATGGCGTTTCAAAAGCCAAAAAACCGTCATCTTCTTCACGCATAAAACAACAGATCTGTTTACCGAAACGATGGATGAAAAGCTGTTGAAGAGGCTGGAGGTCGCCGTAGTGCGGCTAGAATCTCTCTCCGGCGGTTCTCAGCCGCAAACCGTCGCATCAGCCTCATCGGAACCTTCAATTGTCGCGTTTGATGATCTGATTGCGGAATGCGTCGGTAAGGTTTCCGCTGCTGCGGAGAAGATCGGCGGACACGTTAAGGATATTACGAATGTTGTTAGTGACGCTTTTCGTGTTCAGAAGGAGCTTCTCGTTGAAATAAAACGAACTCAGAAACCTGATGCGGGAGGAATGGCGGAATTTCTCAAACCATTGAATGAAAAATTAACTGAAGCACACATGAAAGCCGGATCGCACTCTGGTTTCTCCAACCACTTGAAATCGACCGCTGAGAGTCTAACCGCTTTAGCATGGATTGCATACACAGGAAAAGATTGCGGAATGAGCATGCCTATTGGACATGTGGAAGAATGTTGGCAGTCAGCTGAGTTTTACAGCAACAAGGTTCTTGTAGAATACAAAAACAAAGACTCGAATCACGTGGAATGGGCAAAAGCTTTGAAGGAACTTTATGTACCTGGGTTAAGGGATTATGTTAAGAGTCACTATCCTTTAGGACCCGTATGGAGTGCGACAGGCGTAACCGTAACGGCACCATCTAAATCTTCAAAACCAGGTGCTCCTGCTGCTCCTAATCCCCCACCGTCTTCACTTGCCAGCTCATCATCTTCTTCATCATCTTCATCGTCAAAACAAGGAATGGCTGCTGTTTTTCAAGAAATCAGTTCAAAACCCGTTACCGCTGGATTAAAAAAAGTTACAAATGATATGAAGACCAAAAACCGAACAGATAGAGCAGGCTTTGTAAGTTCCGGTGTGAAAGAAGTCAACAAGAGTGTGCCATCTGGCGCTAAAGGCGGACCTCCAAAGCTTGAACTTGTAATGGGTCGCAAATGGGTTGTTGAGTATCAAATTGGTGTGAAGGATTTGTGTATTGATGAGTGTGATCCAAAGCAGACGGTTTATATTTTTGGATGCAAAGATTCCGTTCTACAAATCAAAGGGAAAGTTAACAACATAACCGTTGACAAATGCACAAAAATGGGCGTTGTATTTACGGATGTTGTTGCTGCTTTCGAAATTGTTAATTGCAGCAGTATAGAGGTGCAATGTCAGGGTGCAGCTCCTACCATATCAATAGACAACACGGCAGGTTGCCAGCTGTACTTGAGCAAAGATTCTCTAGGATCTTCTATCACAACTTCAAAGGCTAGTGAAGTTAATGTGATGGTACCCTCGGAAGATCCTAATGCTGATCTGGTGGAACATGCTTTGCCACATCAGTACATTCACACTCACCAGGATGGCCAGTTCGTTACAACCCCCGTCTCGCACTCTGGAGGGGTTTCTGAATGCAGGGATTATGTACCGAAAACCAATTCGTATACGGAGAGTAAACCCGGATGTTTGACAAGTAATAATGCACAGAAAACCGATTCGGATTTGGGGAATAAAGCCAAGTGTTTGACAGTTAACAATGCACCAAAAATTGATGCAAATATGGAGATTAAAACCAGGTGTTTGACGGTAAATAATGCGCAGAAAACCAATTCGGATAGTGGGAATAAGAATAAAACGGACTGTTTGACAGTTAACGAGGCACAGAAAACCGATACGGGTATGGGGAGTAAAACCAACTGTGTGACAACTGATATGAGTTTATACTACATGGCTGCATTATTATGCATTATTTTTGCTATGGTAGTTGCCTTTATGCTATCATCTTGA 1908 43.55 MTRVTRTITCKKPPANAQNRLWRFKSQKTVIFFTHKTTDLFTETMDEKLLKRLEVAVVRLESLSGGSQPQTVASASSEPSIVAFDDLIAECVGKVSAAAEKIGGHVKDITNVVSDAFRVQKELLVEIKRTQKPDAGGMAEFLKPLNEKLTEAHMKAGSHSGFSNHLKSTAESLTALAWIAYTGKDCGMSMPIGHVEECWQSAEFYSNKVLVEYKNKDSNHVEWAKALKELYVPGLRDYVKSHYPLGPVWSATGVTVTAPSKSSKPGAPAAPNPPPSSLASSSSSSSSSSSKQGMAAVFQEISSKPVTAGLKKVTNDMKTKNRTDRAGFVSSGVKEVNKSVPSGAKGGPPKLELVMGRKWVVEYQIGVKDLCIDECDPKQTVYIFGCKDSVLQIKGKVNNITVDKCTKMGVVFTDVVAAFEIVNCSSIEVQCQGAAPTISIDNTAGCQLYLSKDSLGSSITTSKASEVNVMVPSEDPNADLVEHALPHQYIHTHQDGQFVTTPVSHSGGVSECRDYVPKTNSYTESKPGCLTSNNAQKTDSDLGNKAKCLTVNNAPKIDANMEIKTRCLTVNNAQKTNSDSGNKNKTDCLTVNEAQKTDTGMGSKTNCVTTDMSLYYMAALLCIIFAMVVAFMLSS 635
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean4g04502 635 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 348 507 IPR036223 -
Hean4g04502 635 MobiDBLite consensus disorder prediction 276 290 - -
Hean4g04502 635 ProSiteProfiles C-CAP-cofactor C-like domain profile. 348 485 IPR017901 -
Hean4g04502 635 SMART carp 386 423 IPR006599 -
Hean4g04502 635 SMART carp 424 461 IPR006599 -
Hean4g04502 635 Pfam CAP, N-terminal domain 84 245 IPR053950 -
Hean4g04502 635 Gene3D - 80 254 IPR036222 -
Hean4g04502 635 ProSitePatterns CAP protein signature 1. 49 61 IPR018106 -
Hean4g04502 635 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 43 506 IPR001837 GO:0003779(InterPro)|GO:0003779(PANTHER)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER)
Hean4g04502 635 FunFam Adenylyl cyclase-associated protein 80 254 - -
Hean4g04502 635 FunFam Adenylyl cyclase-associated protein 347 507 - -
Hean4g04502 635 Pfam Adenylate cyclase associated (CAP) C terminal 348 505 IPR013912 GO:0003779(InterPro)|GO:0007010(InterPro)
Hean4g04502 635 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 80 274 IPR036222 -
Hean4g04502 635 MobiDBLite consensus disorder prediction 256 290 - -
Hean4g04502 635 Gene3D - 347 507 IPR016098 -
Hean4g04502 635 Pfam CAP N-terminal conserved motif 47 78 IPR013992 GO:0003779(InterPro)|GO:0007010(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean4g04502 K17261 adenylyl cyclase-associated protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
100899 Hean10g02907 Hean4g04502
101588 Hean12g02307 Hean4g04502
404073 Hean16g00897 Hean4g04502
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr13:55113032 Hean4g04502 Hean-Chr4:206615158 dispersed
Hean Hean-Chr10:153622450 Hean4g04502 Hean-Chr4:206615158 wgd
Hean Hean-Chr16:27673083 Hean4g04502 Hean-Chr4:206615158 wgd