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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean4g04516 ATGTCGATTCTAGGTTCAAATATCCCCAGCGAGGTTGGTCTGCGGTTGCTTCTTTGCCCACTTGGTTCCAATATTGTCCTAAAAACAGCATGCTGTTCTGTAGGAGTTATTTTACCCGTTTATTCTACGTTCAAAGCAATCGAGACAAATAACAGAACCGAGCAACAAAAGTTGCTTTTATACTGGGCAGCATATGGGACATTTAGCATTGCGGAAATATTTGCAGACAAAATTATATCCTGGTTTCCACTTTACCATCACATGAAGTTTGCTTTTCTTGTTTGGCTTCAGCTTCCCAATACCAATGGCGCAAAACAGTTATACATGAATCATTTACGTCCTTTCCTGTTGAAGCATCAAGCTAACCTCGATCAAATTGTGGCGTTATTGCACAATGAAACGGGTAAATTTATTAGTGCTCACCAAGGAGAATTTCGGTTTGTGAAAGCAATTGTGTTGAAGATTCTGATATCAGCAAAGCATTTGGTCAATGATAGCAGTCAACCCAACCCGCCAGTCCCACCGCCAGAGGGAAGAGCAACCACAGTGCAGAGCACTGCCTCTAATGACAATGATCACGAGTATGATATTAGTGACGACGAGGATGATGATGATGATGGTTTTGTAACCGTCCCTGCAAGTTAA 645 41.86 MSILGSNIPSEVGLRLLLCPLGSNIVLKTACCSVGVILPVYSTFKAIETNNRTEQQKLLLYWAAYGTFSIAEIFADKIISWFPLYHHMKFAFLVWLQLPNTNGAKQLYMNHLRPFLLKHQANLDQIVALLHNETGKFISAHQGEFRFVKAIVLKILISAKHLVNDSSQPNPPVPPPEGRATTVQSTASNDNDHEYDISDDEDDDDDGFVTVPAS 214
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean4g04516 214 MobiDBLite consensus disorder prediction 165 214 - -
Hean4g04516 214 Pfam TB2-DP1, HVA22 family 39 115 IPR004345 -
Hean4g04516 214 PANTHER HVA22-LIKE PROTEINS 35 134 IPR004345 -
Hean4g04516 214 MobiDBLite consensus disorder prediction 194 208 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean4g04516 K17279 receptor expression-enhancing protein 5/6
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr3:110732887 Hean4g04516 Hean-Chr4:206776510 dispersed
Hean Hean-Chr4:206776510 Hean5g01855 Hean-Chr5:109156949 transposed