Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean4g04534 | ATGGAGACGTTACAGGATCTCATCGAAGAGGCAAAGCTGCGTACAACATGGTGGGCGGTTTGTATCTTCATCGTCGCTTTATTCTTAACCAACACTAGCCAATCAATGTGGATGAATGTTCCAGCAGCGATTCTTCTGGTATCAGGTGTCCATTTTATAATAACCGAAGTGGAATTCCGGTGGAAGATTAGGAAACCTAACAGACAATCATACTTAGTACATCTAGAGAGAAAACAATTATCCGTGAATGATTCTCGTCTTACCACTTTGCCTCCTCAACCTAAATGGAAGAAAAAGATTGATTCACCGGTTGTTGAGGCTGCAATGGAGGATTTTGTTAGCAAGATTTTGCAAGAGTTTGTGGTTGATTCGTGGTATTCGGGTTTAACACCTGATAAAGAAGCGCCGCAGCTACTACATGCTGTTATTATGGAGGTTCTTGCTGAAATATCTGCGAGAGTCAAAGACATTAACCTTGTTGACCTGCTAACCAGGGATGTAGTTGATTTAGTAGGGGAACACTTAGAGGTTTTCAGGAAAAACCAAGCTGCAATTGGAAGAGAGGTTATGGTGACGTTATCTTCTGACGAACGAGATGAACGATTAAAACACCATCTAATGGCTTCTAAAGAGCTCCATCCCGCTTTAATATCTTCAGAGAGTGAGTACAAGTTTCTTAAACGAATTATCGGGGCGCTTTTGACGGCAGTTCTTAGACCACGAGAAGCGCAATGCCCTGTAGTTCGGTGCATTGCACGTGAGTTGTTAACGTGTTTGGTAGTCGAACCAGTTATGAGATTTGCATGCCCTGGGCGTATCAATGAGTTGATTGAGGCTCTTTTCCTTGCCAACAATACTAAAGAAGGAAAAGATACAGGTGGTAATCAGTCAACTGATGTAACGGGTCAAAGTCAAACCCCGAATCAGGAAAAAAGTCAAGATTCGACTTTCATGAAAGATGGGTCTACTAGTAGCCAAAAGAACGATACACCTAAAGACCAAAAGGAAACAGTTTTAAACCCATCTGGGCCCATGGCTTGTGGTCCGGTTCAAGACGAACCGTTGAACCCACCGACATCTGCATGGGCCCGGGTACTTGTGGCTGCAACCCAAAGAAGAACCGAAGTTCTTCATCCTGAAAATCTCGAAAATATGTGGACCAAAGGAAGAAACTACAAAAAGAGAACAAATAAGAAAATAGAAGGCTCGGGAATAAATGAAAATTCTAACGATCAAGTAACGGAGCAAAATGTTGATGGCGTTTTGAGCGATCAAAGCAAGACATCCGATCCGTCTGATTTAGTTGATGAAAGTAATTCTCATGTTGTTGGAAGTAAATCTAAAATGGAAAGATCAAATAGTGTTTCGGACTCGAACGTTCAAAATCAAGTTGGCGGATCGATAATTTCGGAGTTTTATAGCGCAAATGTAGATAATTTAAATAATATTAAGACCGTTTCGGATAAAGTAACACGTACTGAAGGGTGTGTTCCAAAGCTCAGGTGTCGGGTTCTGGGAGCATACTATGAAAATATTGACTCAAAATCGATTGCAGTTTATTCGATTGCGGTAACTGATGCTGATAATAAGACTTGGTTTGTGAAAAGAAGATACAGTAATTTTGATAGATTGCACCAATATCTGAAGAACACTCCTAATTATAATTTACAATTGCCTCCGAAAAGAATATTCTCATCTAACACAGAGGACAAATTTGTTTATAAACGTTGTATACAACTTAATAAATATCTTCAGGATCTTTTGTCTATAGCCAATATTGCAGATCAACATGAAGTATGGGACTTCTTGAGCATGTCTTCAAAGAGTTACTCTTTTGGACGATCATCATCCGTTGTGAGAACCTTAGCAGTCAATGTGGACGACGGTTCAATGAAAACAGTTACGAGCCCGTGTCTCCCATCTGATTTGGCTAACAGTTTTACTGACAATGAGGAAGGTGAAAAGGATAGATTAGTTAACCATGACGAAAAAGTGAGCCCCGCTGCACAACCTAATGAGCAGATTGTGGAAAACAGTGAAAACGTTCCTTCGGTTTCTGCTCTTAAAGAAGATCCACTTGGTGTGCCTGCAGAGTGGAGCCCACCAAATGTAAGTGTTCCGTTGCTAAATTTAGTGGACAAGATATTTCAACTCAAGAGACGCGGCTGGTTAAGACGTCAGGTTTTTTGGATATCAAAGCAAATTTTGCAACTAATGATGGAAGATGCTATTGATGATTGGCTTTTGAGGCAAATTCATTTCCTCAGGAGAGATAATATTGTTGCTCAAGGAATTCATATGCTCCAAGATATTCTCTGGCCTGAAGGCACATTTTTTCTAAAATCAAGGACAAGTCAAACAGATTCTTCGCAGTCAAACGACGGATCCGGCAATAAAAATAATAAACAAGGGTCTTTTGAGGAGCAGCTTGAAGCTGCACGTAGAGCTAGTGATATCAAGAAGATGATATTCAAGGGCGCACCAACTACATTGGTCAGCTTGATTGGACGTAAGCAATACAAGCGAAGTGCTAAAGACATATATTATTTTCTCCAGTCTGCTGTATGTTTGAAGCAACTCGGTTATGGTTTACTTGAACTTGCACTCATGGCGATTTTCCCGGAGCTGCAAGGCATCATATTAAATGTTCATGAGAAGAAAAAAGAGCAGGTGGTGTAG | 2679 | 40.57 | METLQDLIEEAKLRTTWWAVCIFIVALFLTNTSQSMWMNVPAAILLVSGVHFIITEVEFRWKIRKPNRQSYLVHLERKQLSVNDSRLTTLPPQPKWKKKIDSPVVEAAMEDFVSKILQEFVVDSWYSGLTPDKEAPQLLHAVIMEVLAEISARVKDINLVDLLTRDVVDLVGEHLEVFRKNQAAIGREVMVTLSSDERDERLKHHLMASKELHPALISSESEYKFLKRIIGALLTAVLRPREAQCPVVRCIARELLTCLVVEPVMRFACPGRINELIEALFLANNTKEGKDTGGNQSTDVTGQSQTPNQEKSQDSTFMKDGSTSSQKNDTPKDQKETVLNPSGPMACGPVQDEPLNPPTSAWARVLVAATQRRTEVLHPENLENMWTKGRNYKKRTNKKIEGSGINENSNDQVTEQNVDGVLSDQSKTSDPSDLVDESNSHVVGSKSKMERSNSVSDSNVQNQVGGSIISEFYSANVDNLNNIKTVSDKVTRTEGCVPKLRCRVLGAYYENIDSKSIAVYSIAVTDADNKTWFVKRRYSNFDRLHQYLKNTPNYNLQLPPKRIFSSNTEDKFVYKRCIQLNKYLQDLLSIANIADQHEVWDFLSMSSKSYSFGRSSSVVRTLAVNVDDGSMKTVTSPCLPSDLANSFTDNEEGEKDRLVNHDEKVSPAAQPNEQIVENSENVPSVSALKEDPLGVPAEWSPPNVSVPLLNLVDKIFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLRQIHFLRRDNIVAQGIHMLQDILWPEGTFFLKSRTSQTDSSQSNDGSGNKNNKQGSFEEQLEAARRASDIKKMIFKGAPTTLVSLIGRKQYKRSAKDIYYFLQSAVCLKQLGYGLLELALMAIFPELQGIILNVHEKKKEQVV | 892 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean4g04534 | 892 | MobiDBLite | consensus disorder prediction | 288 | 358 | - | - | |
| Hean4g04534 | 892 | Pfam | PX domain | 528 | 604 | IPR001683 | GO:0035091(InterPro) | |
| Hean4g04534 | 892 | MobiDBLite | consensus disorder prediction | 400 | 460 | - | - | |
| Hean4g04534 | 892 | MobiDBLite | consensus disorder prediction | 288 | 328 | - | - | |
| Hean4g04534 | 892 | ProSiteProfiles | PX domain profile. | 498 | 610 | IPR001683 | GO:0035091(InterPro) | |
| Hean4g04534 | 892 | SMART | PX-2 | 496 | 606 | IPR001683 | GO:0035091(InterPro) | |
| Hean4g04534 | 892 | Gene3D | - | 502 | 614 | IPR036871 | GO:0035091(InterPro) | |
| Hean4g04534 | 892 | PANTHER | PX SERINE-THREONINE KINASE PXK | 3 | 888 | IPR051837 | - | |
| Hean4g04534 | 892 | SUPERFAMILY | PX domain | 500 | 607 | IPR036871 | GO:0035091(InterPro) | |
| Hean4g04534 | 892 | MobiDBLite | consensus disorder prediction | 784 | 807 | - | - | |
| Hean4g04534 | 892 | Pfam | Sorting nexin C terminal | 723 | 853 | IPR013937 | - | |
| Hean4g04534 | 892 | MobiDBLite | consensus disorder prediction | 402 | 460 | - | - | |
| Hean4g04534 | 892 | ProSiteProfiles | PXA domain profile. | 102 | 285 | IPR003114 | - | |
| Hean4g04534 | 892 | Pfam | PXA domain | 102 | 279 | IPR003114 | - | |
| Hean4g04534 | 892 | SMART | PXA-3 | 102 | 285 | IPR003114 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean4g04534 | K17925 | sorting nexin-13 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 100787 | Hean10g02479 | Hean4g04534 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr16:7033312 | Hean4g04534 | Hean-Chr4:206928718 | dispersed | |
| Hean | Hean-Chr16:21184429 | Hean4g04534 | Hean-Chr4:206928718 | dispersed | |
| Hean | Hean-Chr4:206928718 | Hean4g04536 | Hean-Chr4:206947415 | proximal | |
| Hean | Hean-Chr16:21192299 | Hean4g04534 | Hean-Chr4:206928718 | transposed | |
| Hean | Hean-Chr10:135888869 | Hean4g04534 | Hean-Chr4:206928718 | wgd |