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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean4g04541 ATGGAGGAGATACAAATCATGACACCCTCACCGGCGGCCACCCCCTACACCACCGCACCTTCTTCCCCTCACCGCTTCCCCAGCTTCTTCTACAGCGCACCCACCAGCCCCATCCACGCACTCGTCGGCTTCCAACAACACGACGACACTGATTTCGCATTCAATTTCACCGGAAACCCACAACCCCCCTCCATCTCCGCCGCCGACGAACTCTTCCACGCCGGTATAATCAAGCCCTTAAAGCCTGTTCCCGATGACCCATCTCGTTGTAACAACAAAAACATCAATTCTTTCACTGAAACATTTTCACAAACACCTGGTGATCAAGATTATTTCAGTCAGGCATTTACGCAAACACTTGGTGATCAAACCCAAAACCCGCCCAAACGAGGCCGTAAAACCATCACCAGCGCCAGAACAACCAGAGACAAACTCTCACGATCCTCGTCTCCGTTCAGAATCTCCGATATTTTATCCGACGATGAGAACAACAATAATAATAACAAAAATTCTCCAAATTGGTACAGTAAATGGAATCTGAAGAATCTGATACTGTTTCGGAGTGTGTCAGAGGGGAGTGCGAGAAGAAGCAAAGACCCAGTGAATAAATACTCAAGAATAACAACGAAATTCGATGAAGATGTGAAGAATTCAAGCTTTAGAAGCGCAGAGAGTTGCAGGTCGGTGGCGGGAGTGAGTCGGAAGGTGTCGGCGCATGAAATGCATTACACGGCGAACAGGGCGGTGGCGGAGGAGATGCGGCGGAAGACTTACTTGCCGTACAAGTCAGGGTTGTTTGGTTGCTTGGGGTTCCATAACAATGGTGCTGCTGGTAGTGTTCATCAGATTTCTAAAGGGATTACTACTGTTGTTATGAAACAACGATGA 888 48.31 MEEIQIMTPSPAATPYTTAPSSPHRFPSFFYSAPTSPIHALVGFQQHDDTDFAFNFTGNPQPPSISAADELFHAGIIKPLKPVPDDPSRCNNKNINSFTETFSQTPGDQDYFSQAFTQTLGDQTQNPPKRGRKTITSARTTRDKLSRSSSPFRISDILSDDENNNNNNKNSPNWYSKWNLKNLILFRSVSEGSARRSKDPVNKYSRITTKFDEDVKNSSFRSAESCRSVAGVSRKVSAHEMHYTANRAVAEEMRRKTYLPYKSGLFGCLGFHNNGAAGSVHQISKGITTVVMKQR 295
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean4g04541 295 Pfam Protein of unknown function (DUF1645) 68 260 IPR012442 -
Hean4g04541 295 MobiDBLite consensus disorder prediction 119 173 - -
Hean4g04541 295 MobiDBLite consensus disorder prediction 119 134 - -
Hean4g04541 295 MobiDBLite consensus disorder prediction 141 173 - -
Hean4g04541 295 PANTHER OS07G0619500 PROTEIN 17 273 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean4g04541 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
100784 Hean10g02463 Hean4g04541
101592 Hean12g02352 Hean4g04541
404156 Hean16g01396 Hean4g04541
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr3:112684788 Hean4g04541 Hean-Chr4:207043770 dispersed
Hean Hean-Chr4:207043770 Hean9g03724 Hean-Chr9:167394753 dispersed
Hean Hean-Chr2:59613618 Hean4g04541 Hean-Chr4:207043770 transposed
Hean Hean-Chr3:72925962 Hean4g04541 Hean-Chr4:207043770 transposed
Hean Hean-Chr10:135498376 Hean4g04541 Hean-Chr4:207043770 wgd
Hean Hean-Chr16:54261914 Hean4g04541 Hean-Chr4:207043770 wgd