AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean4g04547 ATGTTGACTACCGGAGGAGGTGGGGGCACCTTTTACTGGTTCAGAAACGATCAAGATATCAAAATTCAAGGAATTGTTGTGCTGTTTGCTTGGGGTTCGGTTCGTGAGCTTCAGCTGAAGAGTTATATCGATCTTTATTCGTCTTGTGGCTGGAATTCTCTTGTTGTTCTTGCCCATTTTTTCAATCCAGTTTTTCCTGAGAGAGCCACATCACTTGCATTCTCCGTCCTCAATGAGCTTTTAGAGGAATTGAGGGCTAGACCATGCCCTGTAGTCCTTGCATCTTTTTCCGGTGGTTCTCAAGCTTGTATGTACAAGGTTTTACAGATTATCGAAGGTACATGTGAAGCGCATCTTAATCTGGATGATAGTCGTTTAATCATGACCTGCATCTCTGGTCAAATGTATGACTCTGGTCCAGTTAGTGTAACCGGTGATTTAGGTGCCCGGTTTGCCCTAAGTTCCTCCGTTCTCAACGTGCCCGGGTCATCAAAATTGGTATCAATGGTTGCAAAAGGTGTCACATCGGGTCTAGATGCCATGTTTCTTACTAGATTTGGGTCCCATCGCTCAGAATATTGGCAAACACTTTATTCTTCAGTTGGTTTAGGGGCCCCGTTTCTCATATTGTGTTCGGAAAATGACGAGCTTGCCCCTTATCCAGTTATTTGCTCATTTGCTCAACAAGTACAAGGATTAGGAGGGCATGTTCGACTTATTGGATGGAAGGATTCTCCTCATGTTGGTCACTACAAGCACAATCCCACCCAATACAGAGCCGCTGTAACCGAATTTCTTGATCACTCAATGTCAATATTTAACCAAAAGCTTCAAAAAGTCGGAGAAAGAACCGGCATGGAGGGAATGCACGATAAAATATGTGAATTAATATGTGACCTCCAAAAGGCAGCAGTCGATTCAAACCAAAGTCTTAGAAGAGTAGCAACCGGGCCAAATGACCACTTTTTCTTACCAAGTTCAGCCGAGTGTCAAACTACCAAGGAATCGGGATCGTTACATGATGAAGAAAATGAACGAAAATCAACGGTCCATTTAGGAAGCCCACCGGGCCTGGGCCCACATAGTGTTCTTGGTCAAGTGTTGTTTGATGTGTGTGTGCCTAAAAATATTGAAGGTTGGGATATTAAGTTTGAAAACAGAAAGCCGTTTGAAACCGCGAGTAAACGGTCGTCACCTTTAAAACGCATGAGACGATCAAGATTATGA 1227 43.52 MLTTGGGGGTFYWFRNDQDIKIQGIVVLFAWGSVRELQLKSYIDLYSSCGWNSLVVLAHFFNPVFPERATSLAFSVLNELLEELRARPCPVVLASFSGGSQACMYKVLQIIEGTCEAHLNLDDSRLIMTCISGQMYDSGPVSVTGDLGARFALSSSVLNVPGSSKLVSMVAKGVTSGLDAMFLTRFGSHRSEYWQTLYSSVGLGAPFLILCSENDELAPYPVICSFAQQVQGLGGHVRLIGWKDSPHVGHYKHNPTQYRAAVTEFLDHSMSIFNQKLQKVGERTGMEGMHDKICELICDLQKAAVDSNQSLRRVATGPNDHFFLPSSAECQTTKESGSLHDEENERKSTVHLGSPPGLGPHSVLGQVLFDVCVPKNIEGWDIKFENRKPFETASKRSSPLKRMRRSRL 408
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean4g04547 408 PANTHER UNCHARACTERIZED 7 275 IPR008547 -
Hean4g04547 408 Gene3D alpha-beta hydrolase 139 280 IPR029058 -
Hean4g04547 408 MobiDBLite consensus disorder prediction 330 358 - -
Hean4g04547 408 MobiDBLite consensus disorder prediction 335 349 - -
Hean4g04547 408 Pfam Eukaryotic protein of unknown function (DUF829) 131 380 IPR008547 -
Hean4g04547 408 SUPERFAMILY alpha-beta-Hydrolases 72 268 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean4g04547 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
404154 Hean16g01367 Hean4g04547
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr2:42486363 Hean4g04547 Hean-Chr4:207084136 dispersed
Hean Hean-Chr16:53058079 Hean4g04547 Hean-Chr4:207084136 wgd