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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean4g04557 ATGGAAAACTCCAAACAAACACCTTCGATTCTCTCCAAGCAACGCTCGTGGTCACCGGACATCCACCGCGACATCGAATGGCAGAAACTTAAAAACAATCAACGACGTCGTTTCCGCCACCGCCGGAGCAAGAGCATCGACGGTGCTGCTACTGACACTGACATCACTGACGATGACGTCAAGGAGCTCAAAGCGTGTTTTGACCTAGGTTTCGGTTTCCTTCCGTGTACCGATTTGGATCCGAAACTCTCGCATGCTTTTCCGGCACTCGAATTTTACGCTGCTGTTAACCGCCAGTATAATAGTAGACTCCTGTCAAGGTCCTCTTCGTTAAGCTCCGATTCTTCGTCGAGTTCTTCGTCTCCGACCTCCGTGATTATCGATCCAAGTGATGATCCGCAAAAAGTGAAGATGAGATTGAAACAATGGGCGCAACTGGTTACATGTTCAGTTCTGGAAAGTTCTTCTTCACAGCTAGCGAATAACAAATCTGTTGCAGAATAG 504 47.82 MENSKQTPSILSKQRSWSPDIHRDIEWQKLKNNQRRRFRHRRSKSIDGAATDTDITDDDVKELKACFDLGFGFLPCTDLDPKLSHAFPALEFYAAVNRQYNSRLLSRSSSLSSDSSSSSSSPTSVIIDPSDDPQKVKMRLKQWAQLVTCSVLESSSSQLANNKSVAE 167
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean4g04557 167 PANTHER OSJNBA0071G03.3 PROTEIN 9 152 - -
Hean4g04557 167 MobiDBLite consensus disorder prediction 109 128 - -
Hean4g04557 167 Pfam Protein of unknown function (DUF1685) 55 113 IPR012881 -
Hean4g04557 167 MobiDBLite consensus disorder prediction 109 133 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean4g04557 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
404149 Hean16g01355 Hean4g04557
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr3:94953448 Hean4g04557 Hean-Chr4:207187762 dispersed
Hean Hean-Chr3:95152072 Hean4g04557 Hean-Chr4:207187762 dispersed
Hean Hean-Chr4:207187762 Hean9g03080 Hean-Chr9:148720713 dispersed
Hean Hean-Chr14:136538703 Hean4g04557 Hean-Chr4:207187762 wgd
Hean Hean-Chr16:52528883 Hean4g04557 Hean-Chr4:207187762 wgd