AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean6g02849 ATGTTGGAGAGCAGATTGATTAAGATTATAAGGAGGAGCAGGAGCAAATCCATCAATCAGCTAACATCTTCCTTTTCATCTCACCCCAGATCCACAAATGTTCACACTCGCTTCTCTTCACATACTTATATTGCAAACCCCACCGCCAGAATCTGTTTCATCAATGCCTTTCACAATCTCAACAAGGGTTACTGTAAGCCGTCTTTTAAGTGTATGTCAACTGTGGCTGCGACCGCTTGCAAGGAAAATAAGGAGACAGTGAAGCATCTTGTTACAGCTGGAGCTCATGCTCAAAAGGCGATAGGAATATGGTTATTTGCATCGGCTGCATGGGTCTTTAGTATGGTTATTCTTGGTGGAGTCACACGACTTACTCGATCTGGTCTTTCAATGACTGACTGGAAATTCACTGGCAGTCTTCCTCCTCTTTCGGATGAAGATTGGTTGATTGAATTTGAGAAATATAAACAATCCCCTGAGTTCAAGCGTGTGAACAGAGGAATGAATATTGATGATTTTAAGTTCATATATTGGATGGAATATGCACATCGTATGTGGGGAAGGGCACTAGGGGTAATGTTTGCTCTCCCATTTTCATATTTTATTCGAAAAGGTTATATCAATTTACGCCTTGGAGTTAGACTGGCGGCTCTATTTGCTCTTGGTGGTGGCCAAGGCTTGATTGGTTGGTGGATGGTTAAAAGCGGCTTAGAAGAGCCACCCTCAGAATACTCTCAACCAAGAGTAAGCCCATATCGTCTAGCTGCTCATCTGACATCAGCTTTTGCTATATATTGTGGACTCTTTTGGACTGCTCTTACTGTTGTCATGCCTGAACCTCCAACCGAGTCAATAGCTTGGGTCAAAGGGGCTGCAAAAGTCAAACGGTTTGCTCTTCCGGTTGGCATCCTTGTTGGCATAACTGCAATCTCAGGAGCCTTTGTTGCAGGAAATGATGCAGGACATGCATTTAATACATTTCCAAAGATGGGTGATTCATGGATCCCAGAGGATGTTTTGAGTATGAAGCCACTTATCCGCAACTTCTTTGAGAACACAGCAACTGTGCAGCTTGATCATCGGATACTTGCAACCGCAACCCTAGCATCAATCAGTGCTTTATGGTGGTCAACAAGAAAACTTGATCTACATCCTGCTATCCGTTCTTTGATTGGAAGCACCATGGGAATGGCTGCTCTCCAGGTTACTTTAGGCGTTTCAACTCTTCTATCTTATGTGCCGGTTTCACTTGGCACGGCCCACCAAGCGGGGGCGTTGACTCTTTTAACTTTTATGCTTCTTCTTAATCACACCTTGCGCCGACCGTCATCCATGCTTCTAAAATCACTGCCTGCAGTCACGAAGACAGTTTAA 1374 44.03 MLESRLIKIIRRSRSKSINQLTSSFSSHPRSTNVHTRFSSHTYIANPTARICFINAFHNLNKGYCKPSFKCMSTVAATACKENKETVKHLVTAGAHAQKAIGIWLFASAAWVFSMVILGGVTRLTRSGLSMTDWKFTGSLPPLSDEDWLIEFEKYKQSPEFKRVNRGMNIDDFKFIYWMEYAHRMWGRALGVMFALPFSYFIRKGYINLRLGVRLAALFALGGGQGLIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALTVVMPEPPTESIAWVKGAAKVKRFALPVGILVGITAISGAFVAGNDAGHAFNTFPKMGDSWIPEDVLSMKPLIRNFFENTATVQLDHRILATATLASISALWWSTRKLDLHPAIRSLIGSTMGMAALQVTLGVSTLLSYVPVSLGTAHQAGALTLLTFMLLLNHTLRRPSSMLLKSLPAVTKTV 457
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean6g02849 457 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 67 455 IPR023754 GO:0005743(PANTHER)|GO:0006784(PANTHER)|GO:0006784(InterPro)|GO:0016020(InterPro)|GO:0016653(PANTHER)|GO:0016653(InterPro)
Hean6g02849 457 Pfam Cytochrome oxidase assembly protein 103 432 IPR003780 GO:0006784(InterPro)|GO:0016020(InterPro)|GO:0016653(InterPro)
Hean6g02849 457 Hamap Heme A synthase [ctaA]. 98 442 IPR023754 GO:0006784(InterPro)|GO:0016020(InterPro)|GO:0016653(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean6g02849 K02259 heme a synthase [EC:1.17.99.9]
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
402178 Hean11g01403 Hean6g02849
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:40356949 Hean6g02849 Hean-Chr6:101360198 wgd