AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean6g02850 ATGGATGAAGCAAAGTGGGCGAAACATTACTGTTCGGATCATGAAATACTACTGGTAGGAGAAGGAGATTTCTCGTTTTCTCTTAGTCTGGCTAGGGTTTTTGGCTCTGCTTCTAACATCGTAGCCACATCGCTCGATTCTTATGAACTTGTGATCAAGAAATACGCGAGAGCAAGAACAAACCTGGACATGTTGCATAAAGCTGGAGCTCAGTTGTTATTTGGAGTGGATGCAATGACAATGAAGCTTCATCCTGATCTTCATTGGCGGAAGTTCCACCGGATTATCTACAATTTTCCGCACGCTGGTTTTTTTGGAAAGGAAGATGATCAACTAGTCATCGACAAGCACAGGTATCTGGTTCTCGGTTTCTTTGAAAATGCAAGTCGTATGCTGAGGCCGGGAGGTGAAGTTCATGTATCCCACAAAACTACTCCCCCGTTCGAAAGTTGGAACATCAAAGAACTCGCTTCTAGAAGCTTCTTATCGCTGCTTGAATGTGTCGACTTCAAGATTGAAGACTACCCGGGTTACCACAATAAAAGAGGAGACGGGTGTAGATCCGACGACCCGTTTCCTTTAGGAAAGTGCAGTACTTTCAAATTCGTTGCATCTTCAACATCCAACATATCAGACATCCCACGTCATACTCGTCCTCCCTGTATGAACAACAAAGAATGCCATTGGATTTTCAAGGAGTATCTTGATCAAGCACTTTTGACTTTTGGGAAACATGATGACTATCTTTGCCATTCTGTTCGGGATACACTGGAAATCGGGTTCGAAAGATGCAAGATGGTGAATCCTGCAAATCCCTTGAATGAGTACATCAACCACGTGAAAGAGCTTCACGAAAAGAGTAAAGAAAGGATAGCGTATTTGCAAAAACTTTTGCTGGAAGTTGATCGCCGTAATGGGTTATAG 924 43.07 MDEAKWAKHYCSDHEILLVGEGDFSFSLSLARVFGSASNIVATSLDSYELVIKKYARARTNLDMLHKAGAQLLFGVDAMTMKLHPDLHWRKFHRIIYNFPHAGFFGKEDDQLVIDKHRYLVLGFFENASRMLRPGGEVHVSHKTTPPFESWNIKELASRSFLSLLECVDFKIEDYPGYHNKRGDGCRSDDPFPLGKCSTFKFVASSTSNISDIPRHTRPPCMNNKECHWIFKEYLDQALLTFGKHDDYLCHSVRDTLEIGFERCKMVNPANPLNEYINHVKELHEKSKERIAYLQKLLLEVDRRNGL 307
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean6g02850 307 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 17 182 IPR019446 GO:0070042(InterPro)|GO:0070475(InterPro)
Hean6g02850 307 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 175 IPR029063 -
Hean6g02850 307 PANTHER PHENYLALANYL-TRNA SYNTHETASE 6 183 - GO:0005737(PANTHER)|GO:0070042(PANTHER)|GO:0070475(PANTHER)
Hean6g02850 307 FunFam Os09g0479300 protein 14 165 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean6g02850 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr14:167684419 Hean6g02850 Hean-Chr6:101452105 dispersed
Hean Hean-Chr17:113830036 Hean6g02850 Hean-Chr6:101452105 dispersed
Hean Hean-Chr3:122352250 Hean6g02850 Hean-Chr6:101452105 dispersed