AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean6g02854 ATGGACGCGGAGAGAGTGTCTCTTGTGCGAAAAGATTTTTGTCGATCGAAATCAAGCGTTCACGACGAATTACATAGCTTCAGGTCATGGCTGCGGTGGATGTGCGTTGATCAATCCACATGGCCGACGTTTTGCCTCTCATGGTTGGTCTTCATCATCTTCACCTTCCTTATCCCTGGTCTCTCCCATTTCTTCCTGGCGTGTAGCAATTGCGATAATCGACATGCGAGGCCTTATGATAGCCATGTGCAGCTCTCTCTCAGCAGCATTGCTGCGCTTTCCTTTGTTTGCCTCTCCCAGTTTGTTAGGACTTATGGACTTCGTAGGTTTTTGTTCTTTGATAAGCTTTGTGATGAAAGTGAGACCGTTCGCAGGGGTTATACCCAACAATTCCATAGCTCGCTTACAATACTCTTCATATTTGTTGCACCATGTTTTACTGCTGAGGCTGCATATAAGATCTGGTGGTACACTTCGGGTGCCACCGCCATTCCATTCTTGATCAATGCTATGGTGAGCGATGCTGTAGCCTGCACCTTGGAGCTTGCATCCTGGCTCTATAGAACCGTAGTCTTCTTCCTGGTTTGTATCCTCTTCCACCTTATCTGTCATCTACAAATCCTTCGTCTCCAAGATTTCGCTCAGGTCTTCCATGTGGACTCCGATGTAGAGTCTGTGTTGAATGAACACCTCAGAATCAGGAGACATCTACGCATTATAAGCCACAGGTACCGCATTTTTATACTCTGGGCCCTCATCCTTATCACTATCAGTCAATTCACATCACTCCTTGACACCACGCGGCCCAAAGCAGATCTCAGCATTTTCAAAACCGGTGAAGTTGCATTGGTTTCTGTAAGTTTGCTTGCTGGGCTAATGATACTACTGAGGAGTGCCACAAGGATCACTCATAAGGCCCAAGGGGTGACATGCCTGGCTGCTAAGTGGCATGTGTGTGCAACCATTGAGTCCTTTGATCCACCCGATGCAGCAGACACAGAAACCCCACCTGCAGTGGGAAACCAAGTTTTTCGACCTGATGCATCATCATCTGATAATGAGGCCGGTAGCGAAGATGGGTTAGACAGCATCAAACTCATACCCGCGTATGCTTATAGTACCCTCTCATTCCAGAAGAGGCAGGCCTTAGTTACATATTTTGAAAACAATCCAGCGGGGATAACGGTGTTTGGATTCATGCTGGATAGGAGTTCAGTGCACACTATAGTAATGATAGAAATGTCACTGGTGTTGTGGTTGCTTGGAAAGACTGTTGGTATCTCTTAA 1287 46.7 MDAERVSLVRKDFCRSKSSVHDELHSFRSWLRWMCVDQSTWPTFCLSWLVFIIFTFLIPGLSHFFLACSNCDNRHARPYDSHVQLSLSSIAALSFVCLSQFVRTYGLRRFLFFDKLCDESETVRRGYTQQFHSSLTILFIFVAPCFTAEAAYKIWWYTSGATAIPFLINAMVSDAVACTLELASWLYRTVVFFLVCILFHLICHLQILRLQDFAQVFHVDSDVESVLNEHLRIRRHLRIISHRYRIFILWALILITISQFTSLLDTTRPKADLSIFKTGEVALVSVSLLAGLMILLRSATRITHKAQGVTCLAAKWHVCATIESFDPPDAADTETPPAVGNQVFRPDASSSDNEAGSEDGLDSIKLIPAYAYSTLSFQKRQALVTYFENNPAGITVFGFMLDRSSVHTIVMIEMSLVLWLLGKTVGIS 428
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean6g02854 428 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 10 427 IPR021924 -
Hean6g02854 428 Pfam Protein of unknown function (DUF3537) 22 412 IPR021924 -
Hean6g02854 428 MobiDBLite consensus disorder prediction 330 359 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean6g02854 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402175 Hean11g01311 Hean6g02854
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr13:110988712 Hean6g02854 Hean-Chr6:101645378 dispersed
Hean Hean-Chr3:136602030 Hean6g02854 Hean-Chr6:101645378 dispersed
Hean Hean-Chr6:32549034 Hean6g02854 Hean-Chr6:101645378 dispersed
Hean Hean-Chr6:101645378 Hean11g01311 Hean-Chr11:37337580 transposed