AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean8g00419 ATGTATCAACTTGTTCAGAGTCAACAGTCTGTGTCTATACATGTAATAAAGCTTATATTTTCTTTATATAAATTCATACTCATCTTCTACTTTAATCAATTTCTTCATCATCTTCTGCCACGCATCCACCTTTCTTTCTTATTTGGTTTAAGGAAGATGGCTCATATGGGATCAAGCAAAAACAGAGGGGAGGTGAGAATTCATGAAAGTTTGGATGAACTCAGCACAGATTTGGCTGATTACATAGCCGAATTATCCGAGGCATCGGTTAAAGAACGCGGGTTTTTCGCCATTGCGTTGTCGGGTGGCTCCATCATCAGCTTGATGAGGAATCTATGTGGAGCTCCTTATAACAAGACTGTTGACTGGTCAAAATGGTATATATTTTGGGCAGATGAAAGAGTGGTTGCCAAGAACCATGTTGATAGCAACTATAAGCTTGCTAAAGATCATCTTTTGTCCAAGTTACCTATTGTACCTAGTCATGTACATTCCATCAATGATTCTCTAACCGCAGAAGAAGCTGCAAACGAATACGAGTTTGTGATCAGGCAACTAGTCAGGACCCGTGTGGTCGACGTATCCGAGGTCAGCGACTGCCCGAAGTTTGACTTAATTCTTCTAGGGATGGGTCCGGATGGGCACGTGGCATCTTTGTTTCCGAATCATTCGGCTCTTGAAGAAAAGAACGAATGGGTGACATTTATCACCACGTCCCCTAAGCCTCCGCCCGAAAGAATCACCTTCACACTGCCTGTTATCAACTCTGCCGCCAATGTGGTGGTGGTGGTGACAGGTGGCGGGAAAGCGGAGGCTTCCCGGATGGCGATAGGTGATGTGGGACCCGAGTGTCCGGTTTTGCCAGCTAGGATGATTGAACCAACTGTAGGGAAACTTGTGTGGTTTTTGGATAACCAGGCTGCTTCAAAGCTCTAG 936 44.76 MYQLVQSQQSVSIHVIKLIFSLYKFILIFYFNQFLHHLLPRIHLSFLFGLRKMAHMGSSKNRGEVRIHESLDELSTDLADYIAELSEASVKERGFFAIALSGGSIISLMRNLCGAPYNKTVDWSKWYIFWADERVVAKNHVDSNYKLAKDHLLSKLPIVPSHVHSINDSLTAEEAANEYEFVIRQLVRTRVVDVSEVSDCPKFDLILLGMGPDGHVASLFPNHSALEEKNEWVTFITTSPKPPPERITFTLPVINSAANVVVVVTGGGKAEASRMAIGDVGPECPVLPARMIEPTVGKLVWFLDNQAASKL 311
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean8g00419 311 CDD 6PGL 72 303 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Hean8g00419 311 FunFam Probable 6-phosphogluconolactonase 60 311 - -
Hean8g00419 311 Pfam Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase 71 301 IPR006148 GO:0005975(InterPro)
Hean8g00419 311 Coils Coil 71 91 - -
Hean8g00419 311 SUPERFAMILY NagB-RpiA-CoA transferase-like 65 311 IPR037171 -
Hean8g00419 311 NCBIfam 6-phosphogluconolactonase 67 311 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Hean8g00419 311 PANTHER 6-PHOSPHOGLUCONOLACTONASE 51 311 IPR039104 -
Hean8g00419 311 Gene3D - 60 311 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean8g00419 K01057 6-phosphogluconolactonase [EC:3.1.1.31]
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
402507 Hean12g01075 Hean8g00419
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3228917 Hean Hean17g04555 Hean-Chr17:194744687 Hean8g00419 Hean-Chr8:7227674
3280146 Hean Hean8g01968 Hean-Chr8:60129019 Hean8g00419 Hean-Chr8:7227674
3284124 Hean Hean12g01075 Hean-Chr12:23094912 Hean8g00419 Hean-Chr8:7227674