AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu10g00124 | ATGAGAATGAAAAGAAACATGTCTTACAAGATTTATCTCCTAACTCTTCTCATTGTAGCCTCACTTGTTTCATCATCATTTGCAGCCCGTTGCGGTTCGTCCATTCCAATGGTGAAACTTGGTGCAACTGATCAAAATCAGGAATCTTTATATGAAGAAGATCAAATTTTGGGGAGGGATGATATTATTCACGAGAGGCTGCTAAGGGTTAATACAAAAGATTATGGACGATCGGATCCTGCACCGACGTTTGTCAAGCCTCCGTTTAAACTCATACCGAACTAG | 285 | 40.35 | MRMKRNMSYKIYLLTLLIVASLVSSSFAARCGSSIPMVKLGATDQNQESLYEEDQILGRDDIIHERLLRVNTKDYGRSDPAPTFVKPPFKLIPN | 94 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu10g00124 | 94 | PANTHER | PROTEIN CASPARIAN STRIP INTEGRITY FACTOR 1-RELATED | 3 | 94 | IPR038974 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu10g00124 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 276970 | Hetu10g00124 | Hetu12g00101 | |
| 405274 | Hetu10g00124 | Hetu46g01007 | |
| 405275 | Hetu10g00124 | Hetu47g00983 | |
| 405276 | Hetu10g00124 | Hetu48g00883 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr10:4683348 | Hetu11g00106 | Hetu-Chr11:4091116 | wgd | |
| Hetu | Hetu-Chr10:4683348 | Hetu12g00101 | Hetu-Chr12:4157489 | wgd | |
| Hetu | Hetu-Chr10:4683348 | Hetu46g01007 | Hetu-Chr46:51072264 | wgd | |
| Hetu | Hetu-Chr10:4683348 | Hetu47g00983 | Hetu-Chr47:55664841 | wgd | |
| Hetu | Hetu-Chr10:4683348 | Hetu48g00883 | Hetu-Chr48:47312999 | wgd |