AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu10g00150 | ATGTTTGACACGTCGTTCCTTGCCTTCCAAAAAAACTACGCACCGGGGAACTGTCTTATTCTACACACACCGCATTTCTTAACGCACACGCTTTCAGTATTGTTCCTATCACACAGAAGTTGTAATTGCTGTAATTTGCTAGAGATGGGTACACTATTCAAATCGAGCTTTCTTTTGTTGTTTCTTTGGTTTATTCTGTCTCCAACTGCGTATTCGGGCCCTAATGGTGGATTGGTTAGAGTCGGACTAAAAAAGAGGAAAATCAACCAATTGAACCAAGTTGGTGGACACGCTGGCTCGAATGAAGGAAATACTAGAAGAAATCATGGTGTTCGTGGTAATTTCAGGGATTCGGAGAGCGACATTATTGCCCTAAACAATTACATGGATGCTCAGTATTATGGTGAGATTGGTATTGGTACCCCGCCTCAGAAGTTCACTGTGATTTTTGACACTGGTAGTTCTAATCTGTGGGTCCCTTCTGCAAAGTGCTACTTCTCAGTCGCTTGCCTCTTTCACTCAAAGTATAAGTCCAGCCACTCAAGTTCCTATGAGAAAAATGGTAAATCGGCTGCAATTCAGTATGGAACTGGCTCTATCTCCGGTTTCTTTAGCAAAGACTCTGTGAAGCTTGGTGACCTTGTTGTAAAAGGACAGGATTTTATAGAGGCAACTAAAGAGCCCGGTATCACTTTCTTGGCAGCCAAGTTTGATGGTATACTTGGCCTAGGGTTTCAAGAAATCTCTGTTGGTGATGCTGTTCCTGTTTGGTACAACATGGTGGAACAAGGTCTTGTTCCCGAACCCGTATTTTCATTCTGGCTTAATCGCAATGCTGACGAGGGTGAAGGGGGTGAACTTGTGTTTGGTGGGGTTGATGCCACTCATTTCAAGGGTGAACACACATATGTCCCCGTGACTCAAAAAGGCTACTGGCAGTTTGATATGGGTGAGGTCCTGATTGGTGATAAAACAACCGGATTTTGCGACAATGGTTGTGCGGCAATTGCTGATTCTGGAACTTCTTTGTTGGCTGGTCCAACGGCTGTTGTTACGCAAATCAATCAAGCCATTGGTGCTGCTGGAGTTATGAGCCAACAGTGCAAGACATTGGTCGATCAGTACGGAAAATCTATAATTGAGATGCTACTATCTGAGACGCAACCTGAAAAAGTCTGCTCTCAAATGAAGTTATGCACCTTTGACGGCTCTCATGATACTAACATGATAATCGAGAGTGTAGTTGACAAGAATAACGGAAAATCATCTGGTGTACATGATGAGATGTGTACTCTCTGTGAGATGGCAGTTGTCTGGATGCAAAACCAGATCAAGCGAAATGAAACCGAAGATCAAATAATTAACTATGTTGATCAGCTGTGTGAGCGGATACCAAGTCCAATGGGTGAATCTGGAGTTGACTGCAACAGTCTTTCATCCATGCCTCATATCGCATTTACCATTGGTGGTAAAACTTTTGACCTCTCACCCGAGGAGTATGTCCTGAAAGTTGGTGAAGGAGCAGCAGCACAATGCATTAGTGGATTTACTGCTCTTGATGTGGCTCCTCCTCGTGGGCCCCTATGGATCTTGGGAGATATTTTCATGGGTAAATACCACACGGTGTTTGACTATGGTAAATTACGAGTCGGGTTTGCAGAAGCTGTTTGA | 1671 | 43.81 | MFDTSFLAFQKNYAPGNCLILHTPHFLTHTLSVLFLSHRSCNCCNLLEMGTLFKSSFLLLFLWFILSPTAYSGPNGGLVRVGLKKRKINQLNQVGGHAGSNEGNTRRNHGVRGNFRDSESDIIALNNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSAKCYFSVACLFHSKYKSSHSSSYEKNGKSAAIQYGTGSISGFFSKDSVKLGDLVVKGQDFIEATKEPGITFLAAKFDGILGLGFQEISVGDAVPVWYNMVEQGLVPEPVFSFWLNRNADEGEGGELVFGGVDATHFKGEHTYVPVTQKGYWQFDMGEVLIGDKTTGFCDNGCAAIADSGTSLLAGPTAVVTQINQAIGAAGVMSQQCKTLVDQYGKSIIEMLLSETQPEKVCSQMKLCTFDGSHDTNMIIESVVDKNNGKSSGVHDEMCTLCEMAVVWMQNQIKRNETEDQIINYVDQLCERIPSPMGESGVDCNSLSSMPHIAFTIGGKTFDLSPEEYVLKVGEGAAAQCISGFTALDVAPPRGPLWILGDIFMGKYHTVFDYGKLRVGFAEAV | 556 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu10g00150 | 556 | Gene3D | - | 363 | 465 | - | - | |
| Hetu10g00150 | 556 | Pfam | Saposin-like type B, region 1 | 429 | 465 | IPR007856 | GO:0006629(InterPro) | |
| Hetu10g00150 | 556 | ProSiteProfiles | Peptidase family A1 domain profile. | 133 | 553 | IPR033121 | - | |
| Hetu10g00150 | 556 | Pfam | Eukaryotic aspartyl protease | 132 | 555 | IPR033121 | - | |
| Hetu10g00150 | 556 | ProSiteProfiles | Saposin B type domain profile. | 426 | 467 | IPR008139 | - | |
| Hetu10g00150 | 556 | SUPERFAMILY | Saposin | 364 | 465 | IPR011001 | - | |
| Hetu10g00150 | 556 | FunFam | Lysosomal aspartic protease | 119 | 361 | - | - | |
| Hetu10g00150 | 556 | FunFam | Vacuolar aspartic proteinase | 447 | 555 | - | - | |
| Hetu10g00150 | 556 | SUPERFAMILY | Acid proteases | 58 | 555 | IPR021109 | - | |
| Hetu10g00150 | 556 | CDD | phytepsin | 123 | 554 | IPR033869 | GO:0004190(InterPro) | |
| Hetu10g00150 | 556 | ProSiteProfiles | Saposin B type domain profile. | 363 | 403 | IPR008139 | - | |
| Hetu10g00150 | 556 | SMART | sapb-4 | 327 | 399 | IPR008139 | - | |
| Hetu10g00150 | 556 | SMART | sapb-4 | 428 | 512 | IPR008139 | - | |
| Hetu10g00150 | 556 | Pfam | Saposin-like type B, region 2 | 366 | 399 | IPR008138 | - | |
| Hetu10g00150 | 556 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 335 | 346 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hetu10g00150 | 556 | PRINTS | Pepsin (A1) aspartic protease family signature | 335 | 346 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hetu10g00150 | 556 | PRINTS | Pepsin (A1) aspartic protease family signature | 529 | 544 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hetu10g00150 | 556 | PRINTS | Pepsin (A1) aspartic protease family signature | 139 | 159 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hetu10g00150 | 556 | PRINTS | Pepsin (A1) aspartic protease family signature | 285 | 298 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hetu10g00150 | 556 | PANTHER | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED | 70 | 555 | IPR001461 | GO:0004190(PANTHER)|GO:0004190(InterPro)|GO:0006508(PANTHER)|GO:0006508(InterPro) | |
| Hetu10g00150 | 556 | Gene3D | Acid Proteases | 292 | 555 | IPR021109 | - | |
| Hetu10g00150 | 556 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 148 | 159 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Hetu10g00150 | 556 | Gene3D | Acid Proteases | 79 | 291 | IPR021109 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu10g00150 | K08245 | phytepsin [EC:3.4.23.40] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr10:6415525 | Hetu19g00890 | Hetu-Chr19:70834069 | dispersed | |
| Hetu | Hetu-Chr2:63369720 | Hetu10g00150 | Hetu-Chr10:6415525 | transposed | |
| Hetu | Hetu-Chr10:6415525 | Hetu11g00135 | Hetu-Chr11:5405320 | wgd | |
| Hetu | Hetu-Chr10:6415525 | Hetu11g00385 | Hetu-Chr11:12295951 | wgd | |
| Hetu | Hetu-Chr10:6415525 | Hetu12g00134 | Hetu-Chr12:5646384 | wgd | |
| Hetu | Hetu-Chr10:6415525 | Hetu46g00889 | Hetu-Chr46:44365439 | wgd | |
| Hetu | Hetu-Chr10:6415525 | Hetu47g00873 | Hetu-Chr47:48902568 | wgd | |
| Hetu | Hetu-Chr10:6415525 | Hetu48g00803 | Hetu-Chr48:41533301 | wgd | |
| Hetu | Hetu-Chr10:6415525 | Hetu7g01910 | Hetu-Chr7:80920617 | wgd | |
| Hetu | Hetu-Chr10:6415525 | Hetu8g01748 | Hetu-Chr8:79010492 | wgd | |
| Hetu | Hetu-Chr10:6415525 | Hetu9g01855 | Hetu-Chr9:77631766 | wgd |