Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu10g00237 | ATGATTGATCCTTATATATACACACACACTTTCAAGTTTAAACATGCCACTCAACGCTCTTCCCACCACCCAAAACAACCACCCACCACCCACCGCCGCATCTCCGGCGAAATGTATTCACCGGCGGCGATCACTCTCCTCCTCCTCCTCCTCCTCCTCCTCTTAACCATCACCACCACCACCAATGGTCACAACATCACCCGTATCCTCCAAAAAAACCCAGAATTCTCAACCTTCAACCACTACCTAACCCTAACCCACCTCGCCGGAGAGATCAACCGTCGGCAAACCATCACTGTCTGCGCCGTCGACAATGCCGCCATGTCCGACTTAACCGCCAAAGGCCTCTCACTCGAAACTATCAAAAATGTCCTCTCACTTCACGTCTTTGCAGACTATTATGGCGCCAAAAAGCTCCATGAGATCACCAAAGGCTCCACCTCCACCGCCACCATGTACCAAGCCACCGGCGAAGCCCCTGGCACCACCGGATTCGTTCACATCACTGACGCTAAAGGTGGTAAAGTTCGGTTCACCCCTGAAGATAATCCCTCTCAAACCGACGTCGTTTTTGTTAAATCGGTTCTTGAAATGCCCTACAACATTTCTGTCATCCAGATCAGCCAGGTTTTGAACTCGCCCGAGGCGATGGCACCAACGTCGGCACCGGATCTTAACTTAACGTCGTTGCTACAACGCGAGGGTTGCAAATCGTTTTACAATCTGTTAACAACTTCCGGTGCGATCGGAACGTTTTTGAGCAGCGTTGACGGTGGAGTAACGGTGTTTTGTCCGAGTGACGACGCGGTAAAGGAGTTCGGGCCAAAATACAAAAACCTAACGGCGGAAGGTAAGACGGCGTTACTGTTGTACCACGGTGTTCCAACATACAACTCCATGGGGATGTTGAGATCCAGCAACGGCTTGATGAACACGTTAGCGACCGAAGGAGCGAATAAGTACGATTTCACGGTGCAAAACGACGGCGAGGATGTGAAGTTGAAGACGAAAGTTGTTACGGCGGAGATTTCAGGGACGGTAGTTGATGATGAGCCGGTGGCGATTTATCGGATTGATAAGGTTTTGATGCCGCGGGAGTTGTTTAAGGCGACGGTGGCCGCGAAGAAAGGTGACGATGCGGAAGCGCCTGGACCAGACTCGTCGGATGATTCTGGTGATGATAATGCGGCGGATCAGAAGGCGAATTCCAGTGGAAAGGTGGTGGCACCGGTTGTTATGGTGTTGTTTATTGTTGTTGCGTTCTTGTGA | 1269 | 51.06 | MIDPYIYTHTFKFKHATQRSSHHPKQPPTTHRRISGEMYSPAAITLLLLLLLLLLTITTTTNGHNITRILQKNPEFSTFNHYLTLTHLAGEINRRQTITVCAVDNAAMSDLTAKGLSLETIKNVLSLHVFADYYGAKKLHEITKGSTSTATMYQATGEAPGTTGFVHITDAKGGKVRFTPEDNPSQTDVVFVKSVLEMPYNISVIQISQVLNSPEAMAPTSAPDLNLTSLLQREGCKSFYNLLTTSGAIGTFLSSVDGGVTVFCPSDDAVKEFGPKYKNLTAEGKTALLLYHGVPTYNSMGMLRSSNGLMNTLATEGANKYDFTVQNDGEDVKLKTKVVTAEISGTVVDDEPVAIYRIDKVLMPRELFKATVAAKKGDDAEAPGPDSSDDSGDDNAADQKANSSGKVVAPVVMVLFIVVAFL | 422 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu10g00237 | 422 | MobiDBLite | consensus disorder prediction | 374 | 403 | - | - | |
| Hetu10g00237 | 422 | MobiDBLite | consensus disorder prediction | 15 | 29 | - | - | |
| Hetu10g00237 | 422 | Gene3D | FAS1 domain | 63 | 212 | IPR036378 | - | |
| Hetu10g00237 | 422 | Pfam | Fasciclin domain | 235 | 364 | IPR000782 | - | |
| Hetu10g00237 | 422 | Pfam | Fasciclin domain | 74 | 155 | IPR000782 | - | |
| Hetu10g00237 | 422 | PANTHER | FASCICLIN-LIKE ARABINOGALACTAN PROTEIN | 42 | 411 | IPR033254 | GO:0046658(PANTHER) | |
| Hetu10g00237 | 422 | MobiDBLite | consensus disorder prediction | 14 | 33 | - | - | |
| Hetu10g00237 | 422 | FunFam | Fasciclin-like arabinogalactan protein 10 | 215 | 365 | - | - | |
| Hetu10g00237 | 422 | ProSiteProfiles | FAS1-BIgH3 domain profile. | 63 | 211 | IPR000782 | - | |
| Hetu10g00237 | 422 | ProSiteProfiles | FAS1-BIgH3 domain profile. | 223 | 362 | IPR000782 | - | |
| Hetu10g00237 | 422 | SMART | fasc-3 | 261 | 365 | IPR000782 | - | |
| Hetu10g00237 | 422 | SMART | fasc-3 | 99 | 215 | IPR000782 | - | |
| Hetu10g00237 | 422 | SUPERFAMILY | FAS1 domain | 69 | 214 | IPR036378 | - | |
| Hetu10g00237 | 422 | Gene3D | FAS1 domain | 232 | 364 | IPR036378 | - | |
| Hetu10g00237 | 422 | FunFam | Fasciclin-like arabinogalactan protein 2 | 62 | 204 | - | - | |
| Hetu10g00237 | 422 | SUPERFAMILY | FAS1 domain | 230 | 364 | IPR036378 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu10g00237 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr10:9809917 | Hetu12g00219 | Hetu-Chr12:8127913 | dispersed | |
| Hetu | Hetu-Chr10:9809917 | Hetu11g00220 | Hetu-Chr11:7711861 | wgd | |
| Hetu | Hetu-Chr10:9809917 | Hetu12g00217 | Hetu-Chr12:8119023 | wgd |