AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu11g00048 ATGGAAAACTCCAAACAAACACCTTCGATTCTCTCCAAGCAACGCTCGTGGTCACCGGACATCCACCGCGACATCGAATGGCAGAAACTTAAAAACAATCAACGACGTCGTTTCCGCCACCGCCGGAGTAAGAGCATCGACGGTGCTGCTACTGACATTGACATCACCGATGATGACGTCAAGGAGCTGAAAGCGTGTTTTGACCTAGGATTCGGTTTCCTTCCGTGTACCGATTTGGATCCGAAACTCTCGCATGCTTTTCCGGCACTCGAATTTTACGCTGCTGTTAACCGCCAGTATAATAGTAGACTCCTGTCAAGGTCCTCGTCGTTAAGCTCCGATTCTTCGTCGACTTCGTCGTCTCCGTCCTCCGTGATTATCGATCCAAGTGATGATCCGCAAAAAGTGAAGATGAGATTGAAACAATGGGCGCAACTGGTTACATGTTCAGTTCTGGAAAGTTCTTCTTCACAGCTAGCGAATAACAAATCTGTTGCAGAATAG 504 47.82 MENSKQTPSILSKQRSWSPDIHRDIEWQKLKNNQRRRFRHRRSKSIDGAATDIDITDDDVKELKACFDLGFGFLPCTDLDPKLSHAFPALEFYAAVNRQYNSRLLSRSSSLSSDSSSTSSSPSSVIIDPSDDPQKVKMRLKQWAQLVTCSVLESSSSQLANNKSVAE 167
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu11g00048 167 PANTHER OSJNBA0071G03.3 PROTEIN 9 152 - -
Hetu11g00048 167 MobiDBLite consensus disorder prediction 109 128 - -
Hetu11g00048 167 Pfam Protein of unknown function (DUF1685) 55 113 IPR012881 -
Hetu11g00048 167 MobiDBLite consensus disorder prediction 109 133 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu11g00048 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
406257 Hetu11g00048 Hetu46g01108
406258 Hetu11g00048 Hetu47g01069
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr11:2295355 Hetu7g02263 Hetu-Chr7:100935569 dispersed
Hetu Hetu-Chr10:3090691 Hetu11g00048 Hetu-Chr11:2295355 wgd
Hetu Hetu-Chr11:2295355 Hetu12g00051 Hetu-Chr12:2645412 wgd
Hetu Hetu-Chr11:2295355 Hetu46g01108 Hetu-Chr46:56593221 wgd
Hetu Hetu-Chr11:2295355 Hetu47g01069 Hetu-Chr47:61056254 wgd
Hetu Hetu-Chr11:2295355 Hetu48g00971 Hetu-Chr48:52680532 wgd