AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu11g00055 ATGGTCAAGACAGTGAGACCACTTTTAGTCTACATTGTAAGGGTATGCGGTCTGAACGAAATCGATGGGGCGCTTGGACTATTAAACTTGGTTCCTTGTGGCAGGAATGTTTATGAACATCAAATAAAAAATGACTCAAATAATCTTCAAAAAGCTGAGGATATGGATATTGATCTACACAAACAAAATGTTGAAGAGAACATTCTATTAGTGTTTGATCAATCAGAAGACTATGCAGATTCACCAGTTTCCGAAGGACTCAGATTCTCACAATCTGTTCTACAGTTCAAGGAAATCAAGAACATTGATGATTTCAGTATCGTTGTGGACGATTTAGTCATAGATTCTTTGATACCGAAACATTTTCAAGTCAAATACTATGATTTATGTCACAGTCAGAAGACATATCTTCATGAAAACCTCTTGAAAGGTCTCAATGTAAAACTAGCAGCTGGGGTAATTCTTGAAACCGTTACAATCGCTGATGCAATCAGAGCTTGTAAAGTTGGCATTACTCGTGATGATTTTGACATATGGGATAAAACCCTTAAAGCCTTTGAAGAGATGGGTATGAAAGTCGGTTTTTTAAGAGCCCGGATTAGTAAGCTTGTCGGGCTTTTGTTTGACTCGAACAAGCTTTTGGAAGCAAAAAAGATTGAGCAAGTGAAGGCAGAAGATGAGATGAGAATCACGAGTAAAAAGCTTTGTGGGATTAAAGATGTCATCAAGAATCTTGATGCTGAGATTGAAACTCTAAAGCTAGCAGGAAAGAATCTTGAATTAGTCTTTTGTAGGGAGGCTAATGCACCTTGGTGA 816 37.62 MVKTVRPLLVYIVRVCGLNEIDGALGLLNLVPCGRNVYEHQIKNDSNNLQKAEDMDIDLHKQNVEENILLVFDQSEDYADSPVSEGLRFSQSVLQFKEIKNIDDFSIVVDDLVIDSLIPKHFQVKYYDLCHSQKTYLHENLLKGLNVKLAAGVILETVTIADAIRACKVGITRDDFDIWDKTLKAFEEMGMKVGFLRARISKLVGLLFDSNKLLEAKKIEQVKAEDEMRITSKKLCGIKDVIKNLDAEIETLKLAGKNLELVFCREANAPW 271
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu11g00055 271 Coils Coil 35 55 - -
Hetu11g00055 271 Coils Coil 242 262 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu11g00055 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr11:2452229 Hetu11g00057 Hetu-Chr11:2479263 dispersed
Hetu Hetu-Chr11:2446921 Hetu11g00055 Hetu-Chr11:2452229 tandem
Hetu Hetu-Chr11:2452229 Hetu11g00056 Hetu-Chr11:2467716 tandem
Hetu Hetu-Chr11:2452229 Hetu48g00977 Hetu-Chr48:53198696 wgd