AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu11g00223 ATGGGGGTTTCCCTCTTAACCAGGCTCCGGCGTGAGAATAAGTACTGTTCCGAGGAGGAAATAAGAGTCCACTTGGCACTTGATGGCTGGCGACACGTGTTGTCTTTTATGTCGGATGGAGCATCTTTGGCGTCACCTGGATATATTCCAGAAGCTTCTAGAAGCTTCTGGATGATACGGTTGATGTCAACGCCATGTAGGATGGGCAACGTGGTGCGTTATAAAGCGCATAAACCGGAGGAGTGTTTATGCAGTTATCTGCTATGCTGGCAGCATGGACCGGGCAATGGAAATGTAACAAAGTCAACTATCGAGGACATTTGTCTTATTACTGATGGTGCTATTCATCCCAAACTTATTGAGTTCGCAAACCTTATGAAGCAACAACTTAAAGGGGCTTCTGTTCAGTCTCAGGTGTTTGGCAGTGTGGGGCATGGTTCTCATGTCGGATCCTCTGCAGAGTTGAGTGATCATGATATCGATATGGGAGGTGTGAAAACAACTGATCGTCATCATTATATTATGTTGGAAAATCTCGAGAAAGATTTGTGTCCACTGTTAATGATGGATTTTATACATGAACATACATCAATCACAGCCGAATCGTATGTTTTCCCAAGTTTGTTAGCTGAAACGTATGCACGAGGAGCAATTATGGTAGATAGCACTACAAAGTTGAAGAGGATTTATGATTTTATAAACAATCCAAATCACTTCATTACATCTTTCTCCGGAAGGCCGTGGGTTCTTGCTGAAGATGATCTTAGAACCGGAACATTCAACGCAAACCTGCATAGCTTGCAGCCTAAGTATGAGAAGTATAGTACAAAGAATGAGTTGAAAGTTGTTCGGTTAGGAACAGAAGAGTACAGAAAATGTAAACAGCTAAAAGATTTATTTTTGGAATTTCGCGGTCATCTAAATGGGCTCGTGAAGAGGTTGGGCATGGAGGAGAAGAAGACTCGGGACCCGTTCAGCTTCTGCAAATTGTGA 993 42.9 MGVSLLTRLRRENKYCSEEEIRVHLALDGWRHVLSFMSDGASLASPGYIPEASRSFWMIRLMSTPCRMGNVVRYKAHKPEECLCSYLLCWQHGPGNGNVTKSTIEDICLITDGAIHPKLIEFANLMKQQLKGASVQSQVFGSVGHGSHVGSSAELSDHDIDMGGVKTTDRHHYIMLENLEKDLCPLLMMDFIHEHTSITAESYVFPSLLAETYARGAIMVDSTTKLKRIYDFINNPNHFITSFSGRPWVLAEDDLRTGTFNANLHSLQPKYEKYSTKNELKVVRLGTEEYRKCKQLKDLFLEFRGHLNGLVKRLGMEEKKTRDPFSFCKL 330
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu11g00223 330 PANTHER SAWADEE PROTEIN 73 320 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu11g00223 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr11:7767378 Hetu50g01199 Hetu-Chr50:53811047 dispersed
Hetu Hetu-Chr11:7767378 Hetu11g00225 Hetu-Chr11:7781395 proximal
Hetu Hetu-Chr41:15058333 Hetu11g00223 Hetu-Chr11:7767378 transposed
Hetu Hetu-Chr10:9834444 Hetu11g00223 Hetu-Chr11:7767378 wgd
Hetu Hetu-Chr11:7767378 Hetu12g00222 Hetu-Chr12:8152486 wgd