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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu11g00234 ATGGATATCGATCCTAAGAAGTTTAAAGATAGAGAGAGAGAACATAAACTCATACAACTCACGACAATGCAGCAAAAGATTGTGGTGAAGGTGAGCATGAACGGGGACAAGAAAACCCGTAAAGCTCTGAAAATCGCGGTTAGTATCTCCGGAGTTGAATCCGCGTCTTTCGTTGGGTCAGATAAAGACCAGATAGCAGTGACCGGTGAAGGTATCGACTCGGTTGAACTGACAAGCTTACTAAGAAAAAAGGTTGGATACACGGAGCTGGTAAGTGTTGGTCCAGTGGAGGCAAAGAAAGAAGAACCAAAGCCCACTGTGCAAGTTGATCCTTATCAGTATTACTATCATAGCTATGGTGTGCCCTATTATTATGTATCTCCGTATTGA 390 43.08 MDIDPKKFKDREREHKLIQLTTMQQKIVVKVSMNGDKKTRKALKIAVSISGVESASFVGSDKDQIAVTGEGIDSVELTSLLRKKVGYTELVSVGPVEAKKEEPKPTVQVDPYQYYYHSYGVPYYYVSPY 129
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu11g00234 129 PANTHER OS04G0464100 PROTEIN 25 106 IPR044296 -
Hetu11g00234 129 Gene3D - 20 98 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu11g00234 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
279393 Hetu12g00229 Hetu11g00234
406317 Hetu11g00234 Hetu32g00557
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr10:10158022 Hetu11g00234 Hetu-Chr11:8226703 dispersed
Hetu Hetu-Chr10:10221581 Hetu11g00234 Hetu-Chr11:8226703 dispersed
Hetu Hetu-Chr11:8186146 Hetu11g00234 Hetu-Chr11:8226703 dispersed
Hetu Hetu-Chr11:8226703 Hetu12g00234 Hetu-Chr12:8740776 dispersed
Hetu Hetu-Chr11:8226703 Hetu11g00236 Hetu-Chr11:8303394 proximal