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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu12g00223 ATGGAGGTTTCCGACGACGACTACAATCTCGAATTCCGATCGGTGAAAGATGACGCCTGGTACACCTGCGCCGTCGTTCTCGACCACGGCAACCACCACCTCCGTGTGAAGCTCGAAGGCTACAGTCAAAGCTACTTCGACGAAGTTTTCTCCATCGCTGATTTCTCCACTCACGGATGGAATTGTTATCTGCTATTTAGGCCGTGGGTAATGGCTGAAAATATTCTTAGAAGTGGAACATTCAACACAAACCTGCTGAGCTTGCAGCCTAACTATGAGAACTGGAATACGGAGAACGTGCTGAAGGTTGTTCGCGTTGGAACAGAAGAATCCAGAAAAGCTAAACAGCTAAAAGATTTATATTTGAAATTTCGCAATCATCTAAATGTGCTTGTGCAGAGGCTGGATACGGAGGAGAAGAAGGAACCAGGCGCGTTCAGTTTCTGCAAATTGTAA 456 46.27 MEVSDDDYNLEFRSVKDDAWYTCAVVLDHGNHHLRVKLEGYSQSYFDEVFSIADFSTHGWNCYLLFRPWVMAENILRSGTFNTNLLSLQPNYENWNTENVLKVVRVGTEESRKAKQLKDLYLKFRNHLNVLVQRLDTEEKKEPGAFSFCKL 151
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu12g00223 151 PANTHER SAWADEE PROTEIN 67 141 - -
Hetu12g00223 151 Pfam SAWADEE domain 7 52 IPR032001 GO:0003682(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu12g00223 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
277000 Hetu10g00242 Hetu12g00223
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr10:9840360 Hetu12g00223 Hetu-Chr12:8158402 dispersed
Hetu Hetu-Chr11:7781395 Hetu12g00223 Hetu-Chr12:8158402 dispersed
Hetu Hetu-Chr12:8158402 Hetu50g01199 Hetu-Chr50:53811047 dispersed
Hetu Hetu-Chr12:8152486 Hetu12g00223 Hetu-Chr12:8158402 tandem