Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu16g02407 | ATGAACAAACTGGGCAGAGGGCATCGTGACAAAGTACAACAATTCATGACAATCACTGGAGCAAGTGAAAAAGTTGCTCTCCAGGCTTTAAAGTCTAGCGATTGGCATCTTGATGGTGCATTTGATATCTTTTACAGCCAGCCTCATGCTAAATCATTCACAGATACACGCCATTTAGAGGAATTGTACAACAGATACAAAGATCCTTATACTGATATGATTATGGCTGATGGCATTACCACCCTCTGCAATGATCTTCAGGTAATAATAACATACATTTGCATTGCTCAGGTGGATCCTCAAGATATTGTTATGTTAGTTGTTTCATGGCACATGAAGGCTGCTACCATGTGTGAATTCTCGAAACAGGAATTTGTTGGTGGCTTGCAGTCTTTAGGGATAGATTCACGGGAGAAGTTCCGTGAAAAGATACCTTTTATGCGTTCTGAGCTGAAGGATGATCAAAAATTCAAGGAGATCTATAATTTTGCGTTTGGCTGGGCAAAAGAGAAGGGTCAGAAGTCTTTGGCATTGGATACAGCAATTGGGATGTGGCAATTGTTGTTTGAAGAAAAACAGTGGCCATTGGTTGAGCATTGGTGCCAGTTTTTACAGGCACGGCATAATAAAGCTATTTCTCGAGATACTTGGTCTCAGTTACTGGAATTTGCAAGAAGTGTGGACCCTACACTATCAAATTATGATGCTGAAGGTGCTTGGCCATATTTAATTGATGAATTTGTGGAGTACTTAACAGAAAATGGCATCATTCAGAAGGGGCGGATGAAGGAGTGGTTGTAA | 801 | 40.7 | MNKLGRGHRDKVQQFMTITGASEKVALQALKSSDWHLDGAFDIFYSQPHAKSFTDTRHLEELYNRYKDPYTDMIMADGITTLCNDLQVIITYICIAQVDPQDIVMLVVSWHMKAATMCEFSKQEFVGGLQSLGIDSREKFREKIPFMRSELKDDQKFKEIYNFAFGWAKEKGQKSLALDTAIGMWQLLFEEKQWPLVEHWCQFLQARHNKAISRDTWSQLLEFARSVDPTLSNYDAEGAWPYLIDEFVEYLTENGIIQKGRMKEWL | 266 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu16g02407 | 266 | Gene3D | - | 52 | 152 | - | - | |
| Hetu16g02407 | 266 | ProSiteProfiles | DCUN1 domain profile. | 54 | 252 | IPR005176 | - | |
| Hetu16g02407 | 266 | SUPERFAMILY | UBA-like | 7 | 46 | IPR009060 | GO:0005515(InterPro) | |
| Hetu16g02407 | 266 | Gene3D | - | 6 | 47 | - | - | |
| Hetu16g02407 | 266 | CDD | UBA-DCNL | 8 | 48 | - | - | |
| Hetu16g02407 | 266 | FunFam | Defective in cullin neddylation protein | 153 | 258 | - | - | |
| Hetu16g02407 | 266 | Pfam | UBA-like domain | 9 | 47 | - | - | |
| Hetu16g02407 | 266 | Gene3D | Cullin, PONY binding domain | 153 | 260 | IPR042460 | - | |
| Hetu16g02407 | 266 | PANTHER | RP42 RELATED | 24 | 254 | IPR014764 | GO:0000151(PANTHER)|GO:0031624(PANTHER)|GO:0032182(PANTHER)|GO:0045116(PANTHER)|GO:0097602(PANTHER) | |
| Hetu16g02407 | 266 | FunFam | Defective in cullin neddylation protein | 6 | 47 | - | - | |
| Hetu16g02407 | 266 | Pfam | Cullin binding | 140 | 250 | IPR005176 | - | |
| Hetu16g02407 | 266 | FunFam | DCN1-like protein | 54 | 152 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu16g02407 | K17822 | DCN1-like protein 1/2 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 282001 | Hetu16g02407 | Hetu17g02320 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr16:124822719 | Hetu34g01505 | Hetu-Chr34:117430951 | dispersed | |
| Hetu | Hetu-Chr16:124822719 | Hetu17g02320 | Hetu-Chr17:119148210 | wgd | |
| Hetu | Hetu-Chr16:124822719 | Hetu18g02610 | Hetu-Chr18:127394526 | wgd | |
| Hetu | Hetu-Chr16:124822719 | Hetu18g02594 | Hetu-Chr18:125068881 | wgd |