Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hetu16g02483 | ATGGCTTCCATGACTACCACCACCTTCACCTCATCTCTCTCCAACAAGACCTCCTATCAATCATCCTTCCATGGGGTTTTTCCTATGCGGATCCAATCCCTCGTCGTTAAATCAAACAAAAACAACAACAACACGCCTATCACCATGTCTTACGACCTCGGTCAATTCACCTTTCAACCCATCAAGGAGGCCATCGTGTCTCGTGAAATGACCAGGAGGTACATGACTGATATGATCACCTACGCCGATACGGATGTTGTCGTCGTTGGTGCTGGTTCCGCTGGTCTCTCCTGCGCTTACGAGCTTAGCAAGAACCCTAACGTTCAGGTAGCCATCATCGAGCAATCTGTGAGCCCTGGTGGCGGAGCATGGCTGGGAGGACAACTCTTCTCCGCCATGGTTGTCCGCAAACCCGCACACCACTTCCTTGACGAGCTTGAGATCGAGTACGACGAGCAAGAAGACTACGTGGTCATCAAACACGCGGCTCTGTTCACATCGACCATCATGAGCAAGCTTTTGGCAAGGCCAAACGTGAAGCTCTTCAATGCGGTTGCTGCGGAGGATTTGATCATCAAGGAAGGGAGAGTTGGTGGCGTTGTAACCAACTGGGCTTTGGTGTCGATGAACCATGACACACAGTCATGCATGGACCCTAACGTCATGGAGGCTAAGGTGGTTGTCAGCTCATGTGGTCATGATGGTCCCATGGGTGCCACCGGGGTCAAGCGCCTCAGGAGCGTTGGGATGATTGAAAGCGTTCCCGGGATGAAAGCTCTCAACATGAACACTGCCGAAGACGCAATCGTCAAGCTCACAAGAGAGATTGTTCCGGGTATGATCGTTACCGGAATGGAAGTTGCAGAGATTGATGGATCTCCTAGAATGGGGCCAACATTTGGAGCTATGATGATATCTGGACAGAAAGCGGCTCATCTGGCATTGAAGGCCCTCGGGCTGCCGAATGCATTGGATGGGACAAGCCTTCACCCCGAGCTGATCCTTGCGGCTGCTGATTCTGGCGAGACCGTTGATGCCTAA | 1041 | 52.07 | MASMTTTTFTSSLSNKTSYQSSFHGVFPMRIQSLVVKSNKNNNNTPITMSYDLGQFTFQPIKEAIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKEGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGMIESVPGMKALNMNTAEDAIVKLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGLPNALDGTSLHPELILAAADSGETVDA | 346 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hetu16g02483 | 346 | FunFam | Thiamine thiazole synthase, chloroplastic | 83 | 318 | - | - | |
| Hetu16g02483 | 346 | Gene3D | - | 52 | 82 | - | - | |
| Hetu16g02483 | 346 | Hamap | Thiamine thiazole synthase, chloroplastic [THI4]. | 3 | 327 | IPR027495 | GO:0009228(InterPro) | |
| Hetu16g02483 | 346 | Pfam | Thi4 family | 67 | 300 | - | - | |
| Hetu16g02483 | 346 | SUPERFAMILY | FAD-NAD(P)-binding domain | 47 | 311 | IPR036188 | - | |
| Hetu16g02483 | 346 | NCBIfam | sulfide-dependent adenosine diphosphate thiazole synthase | 63 | 318 | IPR002922 | - | |
| Hetu16g02483 | 346 | PANTHER | THIAMINE THIAZOLE SYNTHASE | 13 | 345 | - | - | |
| Hetu16g02483 | 346 | Gene3D | - | 83 | 327 | IPR036188 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hetu16g02483 | K03146 | cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 282959 | Hetu16g02483 | Hetu18g02642 | |
| 285370 | Hetu18g02642 | Hetu16g02483 | |
| 409878 | Hetu16g02483 | Hetu31g00880 | |
| 409879 | Hetu16g02483 | Hetu32g00925 | |
| 409880 | Hetu16g02483 | Hetu33g00984 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hetu | Hetu-Chr16:130496058 | Hetu18g02714 | Hetu-Chr18:135914936 | dispersed | |
| Hetu | Hetu-Chr16:130496058 | Hetu17g02341 | Hetu-Chr17:121696834 | wgd | |
| Hetu | Hetu-Chr16:130496058 | Hetu18g02642 | Hetu-Chr18:129058874 | wgd | |
| Hetu | Hetu-Chr16:130496058 | Hetu31g00880 | Hetu-Chr31:40049120 | wgd | |
| Hetu | Hetu-Chr16:130496058 | Hetu32g00925 | Hetu-Chr32:43814125 | wgd | |
| Hetu | Hetu-Chr16:130496058 | Hetu33g00984 | Hetu-Chr33:42574629 | wgd |