AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu16g02512 ATGCAATCCAACTCCAAGGAGCTTTGCATCATATTTACTGTTCAATGCAAGATGCGGGCTAAAAACAGAAACAAAAGTGCGGTAGTTTTGCCTCAAAATTCCCCGACTGACCACATTTTTCGACCGCTAAATTCTTATGAAGGTGAAAGTCTCCTTCATCTTCTCAGTTCAATTCAGAGAGAAATTAAGTCAGCCAGATTTGCGGATCAATCGTTACCTCATAAAATTTGGCTCAAGCAACAATTTTCAATTGGTGTCAATGATGTGACCCGTGTACTTGAACGAATGCCAGCGGTTCATGGATCTATTAGCTCTCCCCTACAAAAGGCCACTTACTGTAGTCGTAATGCTAAACAGCCTCCCCTCCGACTTCAGGCCATTCTTATAGCAAGCGACTGTAATCCTCGAGGACTTACAAAGCATCTGCCAATCCTGGCCTCGTCCAGGGAAGTGCCTGTCATCTTTGTGAAAGACAAGACAGGTGGATCGTTTAAGTTGGGTGAAATTGTGAATTTGAAGACGGCTATGGCAATTGGAGTTAAAGCTAGAGGAAATTCAGTTAACAAGATGATAAGTGAGATTCTTGGAGGTAATGATTGTGGGCCCGCGAATGAAACAAATGACGAGGTGTTCATACAGAATCCACAAGCTTTGTTAGAAGACTAG 666 42.79 MQSNSKELCIIFTVQCKMRAKNRNKSAVVLPQNSPTDHIFRPLNSYEGESLLHLLSSIQREIKSARFADQSLPHKIWLKQQFSIGVNDVTRVLERMPAVHGSISSPLQKATYCSRNAKQPPLRLQAILIASDCNPRGLTKHLPILASSREVPVIFVKDKTGGSFKLGEIVNLKTAMAIGVKARGNSVNKMISEILGGNDCGPANETNDEVFIQNPQALLED 221
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu16g02512 221 SUPERFAMILY L30e-like 72 194 IPR029064 -
Hetu16g02512 221 PANTHER OS07G0636400 PROTEIN 18 199 - -
Hetu16g02512 221 Pfam Ribosomal protein L7Ae-L30e-S12e-Gadd45 family 125 186 IPR004038 -
Hetu16g02512 221 Gene3D - 65 195 IPR029064 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu16g02512 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
282963 Hetu16g02512 Hetu18g02673
285374 Hetu18g02673 Hetu16g02512
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3563241 Hetu Hetu16g02512 Hetu-Chr16:131759007 Hetu17g02356 Hetu-Chr17:123111346
3564637 Hetu Hetu16g02512 Hetu-Chr16:131759007 Hetu18g02673 Hetu-Chr18:132339620
3564993 Hetu Hetu16g02512 Hetu-Chr16:131759007 Hetu18g02655 Hetu-Chr18:130460859